| Chain sequence(s) |
A: FEKGHFEF
C: FEKGHFEF B: FEKGHFEF D: FEKGHFEF input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.7777 | |
| 2 | E | A | -1.6818 | |
| 3 | K | A | -2.4561 | |
| 4 | G | A | -2.1668 | |
| 5 | H | A | -2.8163 | |
| 6 | F | A | -1.4259 | |
| 7 | E | A | -1.5264 | |
| 8 | F | A | 0.4496 | |
| 1 | F | B | 0.6250 | |
| 2 | E | B | -1.9003 | |
| 3 | K | B | -2.8294 | |
| 4 | G | B | -2.0623 | |
| 5 | H | B | -2.5823 | |
| 6 | F | B | -1.2638 | |
| 7 | E | B | -1.2314 | |
| 8 | F | B | 0.7766 | |
| 1 | F | C | 0.6539 | |
| 2 | E | C | -1.7957 | |
| 3 | K | C | -2.6596 | |
| 4 | G | C | -2.0251 | |
| 5 | H | C | -2.3467 | |
| 6 | F | C | -1.1041 | |
| 7 | E | C | -0.9679 | |
| 8 | F | C | 0.8103 | |
| 1 | F | D | 0.8033 | |
| 2 | E | D | -1.5335 | |
| 3 | K | D | -2.0871 | |
| 4 | G | D | -1.8514 | |
| 5 | H | D | -2.6071 | |
| 6 | F | D | -1.2819 | |
| 7 | E | D | -1.4478 | |
| 8 | F | D | 0.5379 |