| Chain sequence(s) |
A: IQKVQDDTKTLIKTIVTRINDILDFIPGLHPILTLSKMDQTLAVYQQILTSMPSRNVIQISNDLENLRDLLHVLAFSKSCHLPEASGLETLDSLGGVLEASGYSTEVVALSRLQGSLQDMLWQLDLSPGC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | KV5A,VY6A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 1.0351 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:01:18)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:43)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:05)
[INFO] Main: Simulation completed successfully. (00:02:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | I | A | 0.9446 | |
| 4 | Q | A | -0.6922 | |
| 5 | V | A | 1.4121 | mutated: KV5A |
| 6 | Y | A | 0.7900 | mutated: VY6A |
| 7 | Q | A | -0.6521 | |
| 8 | D | A | -1.9605 | |
| 9 | D | A | -2.1200 | |
| 10 | T | A | 0.0000 | |
| 11 | K | A | -0.6191 | |
| 12 | T | A | -0.1459 | |
| 13 | L | A | 0.1898 | |
| 14 | I | A | 0.0000 | |
| 15 | K | A | -1.4662 | |
| 16 | T | A | -0.2966 | |
| 17 | I | A | 0.0000 | |
| 18 | V | A | 0.1788 | |
| 19 | T | A | -0.1159 | |
| 20 | R | A | -0.4970 | |
| 21 | I | A | 0.0000 | |
| 22 | N | A | -1.6096 | |
| 23 | D | A | -1.6579 | |
| 24 | I | A | 1.6828 | |
| 39 | L | A | 0.5789 | |
| 40 | D | A | -1.2592 | |
| 41 | F | A | 1.6552 | |
| 42 | I | A | 0.5878 | |
| 43 | P | A | -0.2169 | |
| 44 | G | A | -0.1449 | |
| 45 | L | A | 0.0000 | |
| 46 | H | A | -0.9957 | |
| 47 | P | A | 0.0620 | |
| 48 | I | A | 1.6195 | |
| 49 | L | A | 1.1390 | |
| 50 | T | A | 0.1251 | |
| 51 | L | A | 0.0000 | |
| 52 | S | A | -0.1904 | |
| 53 | K | A | -0.9566 | |
| 54 | M | A | 0.0000 | |
| 55 | D | A | 0.0000 | |
| 56 | Q | A | -0.3299 | |
| 57 | T | A | 0.0000 | |
| 58 | L | A | 0.0000 | |
| 59 | A | A | 0.0065 | |
| 60 | V | A | 0.0000 | |
| 61 | Y | A | 0.0000 | |
| 62 | Q | A | -0.1756 | |
| 63 | Q | A | -0.3390 | |
| 64 | I | A | 0.0000 | |
| 65 | L | A | 0.0000 | |
| 66 | T | A | -0.1098 | |
| 67 | S | A | -0.2043 | |
| 68 | M | A | 0.0315 | |
| 69 | P | A | -0.2637 | |
| 70 | S | A | -0.5506 | |
| 71 | R | A | -1.9079 | |
| 72 | N | A | -0.5861 | |
| 73 | V | A | 0.0000 | |
| 74 | I | A | 1.2697 | |
| 75 | Q | A | -0.3204 | |
| 76 | I | A | 0.0000 | |
| 77 | S | A | -0.1195 | |
| 78 | N | A | -1.2771 | |
| 79 | D | A | 0.0000 | |
| 80 | L | A | 0.0000 | |
| 81 | E | A | -2.0533 | |
| 82 | N | A | -1.6067 | |
| 83 | L | A | 0.0000 | |
| 84 | R | A | -0.6981 | |
| 85 | D | A | -1.8197 | |
| 86 | L | A | -0.1246 | |
| 87 | L | A | 0.0000 | |
| 88 | H | A | -0.3930 | |
| 89 | V | A | 0.4944 | |
| 90 | L | A | 0.0000 | |
| 91 | A | A | 0.0000 | |
| 92 | F | A | 1.9398 | |
| 93 | S | A | 0.1604 | |
| 94 | K | A | -0.5709 | |
| 95 | S | A | -0.0777 | |
| 96 | C | A | -0.0603 | |
| 97 | H | A | -0.9280 | |
| 98 | L | A | -0.0555 | |
| 99 | P | A | -0.5629 | |
| 100 | E | A | -1.8644 | |
| 101 | A | A | -0.3548 | |
| 102 | S | A | -0.2969 | |
| 103 | G | A | -0.4289 | |
| 104 | L | A | -0.0173 | |
| 105 | E | A | -1.7489 | |
| 106 | T | A | -0.3017 | |
| 107 | L | A | 0.0267 | |
| 108 | D | A | -1.7620 | |
| 109 | S | A | -0.5411 | |
| 110 | L | A | 0.0000 | |
| 111 | G | A | -0.3253 | |
| 112 | G | A | -0.4196 | |
| 113 | V | A | 0.4147 | |
| 114 | L | A | 0.0000 | |
| 115 | E | A | -1.8170 | |
| 116 | A | A | -0.3612 | |
| 117 | S | A | -0.2956 | |
| 118 | G | A | -0.3191 | |
| 119 | Y | A | 0.9053 | |
| 120 | S | A | 0.0571 | |
| 121 | T | A | -0.3332 | |
| 122 | E | A | -1.3754 | |
| 123 | V | A | 0.4199 | |
| 124 | V | A | 0.0000 | |
| 125 | A | A | 0.0000 | |
| 126 | L | A | 0.0000 | |
| 127 | S | A | -0.0610 | |
| 128 | R | A | -0.2310 | |
| 129 | L | A | 0.0000 | |
| 130 | Q | A | -0.2796 | |
| 131 | G | A | -0.2139 | |
| 132 | S | A | 0.0000 | |
| 133 | L | A | 0.0000 | |
| 134 | Q | A | -1.1679 | |
| 135 | D | A | -0.6128 | |
| 136 | M | A | 0.0000 | |
| 137 | L | A | 0.3109 | |
| 138 | W | A | 1.2193 | |
| 139 | Q | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | D | A | -1.5009 | |
| 142 | L | A | 1.1754 | |
| 143 | S | A | 0.0690 | |
| 144 | P | A | 0.0000 | |
| 145 | G | A | -0.3295 | |
| 146 | C | A | 0.2084 |