Project name: PRL [mutate: CS4A, HA30A, HA59A]

Status: done

Started: 2026-07-24 05:37:51
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Chain sequence(s) A: LPICPGGAARCQVTLRDLFDRAVVLSHYIHNLSSEMFSEFDKRYTHGRGFITKAINSCHTSSLATPEDKEQAQQMNQKDFLSLIVSILRSWNEPLYHLVTEVRGMQEAPEAILSKAVEIEEQTKRLLEGMELIVSQVHPETKENEIYPVWSGLPSLQMADEESRLSAYYNLLHCLRRDSHKIDNYLKLLKCRIIHNNNC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues HA59A,HA30A,CS4A
Energy difference between WT (input) and mutated protein (by FoldX) -0.986303 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:03:56)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:04:24)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:10)
Show buried residues

Minimal score value
-4.3274
Maximal score value
2.1186
Average score
-1.0054
Total score value
-200.0652

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 1.8708
2 P A 1.3018
3 I A 2.1186
4 S A 0.4547 mutated: CS4A
5 P A -0.0767
6 G A -0.6165
7 G A -0.9720
8 A A -1.0908
9 A A -1.0410
10 R A -1.8210
11 C A -0.8157
12 Q A -0.3554
13 V A 0.9818
14 T A -0.0143
15 L A -0.5462
16 R A -1.8599
17 D A -1.3948
18 L A -0.9487
19 F A 0.0000
20 D A -1.9275
21 R A -2.0002
22 A A 0.0000
23 V A -0.3637
24 V A 0.9067
25 L A 0.3058
26 S A 0.0000
27 H A -0.0965
28 Y A 0.7270
29 I A 0.0000
30 A A 0.0000 mutated: HA30A
31 N A -1.6534
32 L A 0.0000
33 S A 0.0000
34 S A -1.9230
35 E A -2.3562
36 M A 0.0000
37 F A 0.0000
38 S A -2.2203
39 E A -2.4623
40 F A 0.0000
41 D A -2.3780
42 K A -3.3731
43 R A -3.1866
44 Y A -2.3308
45 T A 0.0000
46 H A -2.7691
47 G A -1.4913
48 R A -1.1462
49 G A -0.1820
50 F A 0.9981
51 I A 0.0568
52 T A -0.2520
53 K A -1.0548
54 A A -0.5494
55 I A -0.2035
56 N A -0.8333
57 S A -0.4084
58 C A 0.0000
59 A A 0.2382 mutated: HA59A
60 T A 0.0000
61 S A -0.5184
62 S A 0.0681
63 L A 0.4558
64 A A -0.4036
65 T A -0.9799
66 P A 0.0000
67 E A -3.3584
68 D A -4.2994
69 K A -4.2773
70 E A -4.3274
71 Q A -3.8459
72 A A -3.6584
73 Q A -3.5968
74 Q A -3.2452
75 M A -2.6839
76 N A -2.8108
77 Q A -2.7699
78 K A -2.1574
79 D A -2.1078
80 F A 0.0000
81 L A 0.0000
82 S A -0.9041
83 L A 0.0000
84 I A 0.0000
85 V A 0.0000
86 S A 0.0000
87 I A 0.0000
88 L A 0.0000
89 R A -0.3333
90 S A 0.4251
91 W A 0.0000
92 N A -1.2796
93 E A -0.8899
94 P A 0.0000
95 L A 0.0000
96 Y A 0.5159
97 H A -0.1086
98 L A 0.0000
99 V A 0.0000
100 T A -0.5679
101 E A -1.1614
102 V A 0.0000
103 R A -2.8804
104 G A -2.1749
105 M A -2.1679
106 Q A -2.7052
107 E A -2.9422
108 A A 0.0000
109 P A -2.5563
110 E A -2.6334
111 A A -1.4987
112 I A 0.0000
113 L A -1.4135
114 S A -1.2089
115 K A -1.7007
116 A A 0.0000
117 V A -1.0186
118 E A -1.8150
119 I A 0.0000
120 E A -1.8345
121 E A -2.6506
122 Q A -1.9025
123 T A 0.0000
124 K A -3.0009
125 R A -3.4710
126 L A 0.0000
127 L A 0.0000
128 E A -2.8086
129 G A 0.0000
130 M A 0.0000
131 E A -2.2032
132 L A -0.6691
133 I A 0.0000
134 V A 0.0000
135 S A -1.9011
136 Q A -1.3326
137 V A -0.4282
138 H A -1.5611
139 P A -2.0399
140 E A -2.8884
141 T A -2.8686
142 K A -3.4890
143 E A -3.4005
144 N A -2.1498
145 E A -0.9813
146 I A 1.7603
147 Y A 2.0478
148 P A 1.7299
149 V A 2.0782
150 W A 0.8765
151 S A 0.2365
152 G A -0.0280
153 L A -0.2647
154 P A -0.4005
155 S A -0.5220
156 L A -0.5528
157 Q A -1.3605
158 M A -1.3358
159 A A -1.5813
160 D A -2.9475
161 E A -2.7412
162 E A -2.4024
163 S A -1.8826
164 R A -1.7260
165 L A 0.0000
166 S A -0.5079
167 A A 0.0000
168 Y A 0.0000
169 Y A 0.0000
170 N A -0.4058
171 L A 0.0000
172 L A 0.0000
173 H A -1.2477
174 C A 0.0000
175 L A 0.0000
176 R A -2.6812
177 R A -2.8189
178 D A 0.0000
179 S A 0.0000
180 H A -1.9898
181 K A -1.8025
182 I A 0.0000
183 D A -1.0316
184 N A -1.4696
185 Y A 0.0000
186 L A 0.0000
187 K A -1.5936
188 L A -1.1020
189 L A -1.0468
190 K A -1.9047
191 C A -2.0361
192 R A -2.5193
193 I A -1.3042
194 I A -1.4259
195 H A -2.4186
196 N A -2.8291
197 N A -2.5491
198 N A -1.7832
199 C A -0.7102
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Laboratory of Theory of Biopolymers 2018