| Chain sequence(s) |
A: LPICPGGAARCQVTLRDLFDRAVVLSHYIHNLSSEMFSEFDKRYTHGRGFITKAINSCHTSSLATPEDKEQAQQMNQKDFLSLIVSILRSWNEPLYHLVTEVRGMQEAPEAILSKAVEIEEQTKRLLEGMELIVSQVHPETKENEIYPVWSGLPSLQMADEESRLSAYYNLLHCLRRDSHKIDNYLKLLKCRIIHNNNC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | HA59A,HA30A,CS4A |
| Energy difference between WT (input) and mutated protein (by FoldX) | -0.986303 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:03:56)
[INFO] FoldX: Starting FoldX energy minimalization (00:04:24)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:09)
[INFO] Main: Simulation completed successfully. (00:06:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.8708 | |
| 2 | P | A | 1.3018 | |
| 3 | I | A | 2.1186 | |
| 4 | S | A | 0.4547 | mutated: CS4A |
| 5 | P | A | -0.0767 | |
| 6 | G | A | -0.6165 | |
| 7 | G | A | -0.9720 | |
| 8 | A | A | -1.0908 | |
| 9 | A | A | -1.0410 | |
| 10 | R | A | -1.8210 | |
| 11 | C | A | -0.8157 | |
| 12 | Q | A | -0.3554 | |
| 13 | V | A | 0.9818 | |
| 14 | T | A | -0.0143 | |
| 15 | L | A | -0.5462 | |
| 16 | R | A | -1.8599 | |
| 17 | D | A | -1.3948 | |
| 18 | L | A | -0.9487 | |
| 19 | F | A | 0.0000 | |
| 20 | D | A | -1.9275 | |
| 21 | R | A | -2.0002 | |
| 22 | A | A | 0.0000 | |
| 23 | V | A | -0.3637 | |
| 24 | V | A | 0.9067 | |
| 25 | L | A | 0.3058 | |
| 26 | S | A | 0.0000 | |
| 27 | H | A | -0.0965 | |
| 28 | Y | A | 0.7270 | |
| 29 | I | A | 0.0000 | |
| 30 | A | A | 0.0000 | mutated: HA30A |
| 31 | N | A | -1.6534 | |
| 32 | L | A | 0.0000 | |
| 33 | S | A | 0.0000 | |
| 34 | S | A | -1.9230 | |
| 35 | E | A | -2.3562 | |
| 36 | M | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | S | A | -2.2203 | |
| 39 | E | A | -2.4623 | |
| 40 | F | A | 0.0000 | |
| 41 | D | A | -2.3780 | |
| 42 | K | A | -3.3731 | |
| 43 | R | A | -3.1866 | |
| 44 | Y | A | -2.3308 | |
| 45 | T | A | 0.0000 | |
| 46 | H | A | -2.7691 | |
| 47 | G | A | -1.4913 | |
| 48 | R | A | -1.1462 | |
| 49 | G | A | -0.1820 | |
| 50 | F | A | 0.9981 | |
| 51 | I | A | 0.0568 | |
| 52 | T | A | -0.2520 | |
| 53 | K | A | -1.0548 | |
| 54 | A | A | -0.5494 | |
| 55 | I | A | -0.2035 | |
| 56 | N | A | -0.8333 | |
| 57 | S | A | -0.4084 | |
| 58 | C | A | 0.0000 | |
| 59 | A | A | 0.2382 | mutated: HA59A |
| 60 | T | A | 0.0000 | |
| 61 | S | A | -0.5184 | |
| 62 | S | A | 0.0681 | |
| 63 | L | A | 0.4558 | |
| 64 | A | A | -0.4036 | |
| 65 | T | A | -0.9799 | |
| 66 | P | A | 0.0000 | |
| 67 | E | A | -3.3584 | |
| 68 | D | A | -4.2994 | |
| 69 | K | A | -4.2773 | |
| 70 | E | A | -4.3274 | |
| 71 | Q | A | -3.8459 | |
| 72 | A | A | -3.6584 | |
| 73 | Q | A | -3.5968 | |
| 74 | Q | A | -3.2452 | |
| 75 | M | A | -2.6839 | |
| 76 | N | A | -2.8108 | |
| 77 | Q | A | -2.7699 | |
| 78 | K | A | -2.1574 | |
| 79 | D | A | -2.1078 | |
| 80 | F | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | S | A | -0.9041 | |
| 83 | L | A | 0.0000 | |
| 84 | I | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | S | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | L | A | 0.0000 | |
| 89 | R | A | -0.3333 | |
| 90 | S | A | 0.4251 | |
| 91 | W | A | 0.0000 | |
| 92 | N | A | -1.2796 | |
| 93 | E | A | -0.8899 | |
| 94 | P | A | 0.0000 | |
| 95 | L | A | 0.0000 | |
| 96 | Y | A | 0.5159 | |
| 97 | H | A | -0.1086 | |
| 98 | L | A | 0.0000 | |
| 99 | V | A | 0.0000 | |
| 100 | T | A | -0.5679 | |
| 101 | E | A | -1.1614 | |
| 102 | V | A | 0.0000 | |
| 103 | R | A | -2.8804 | |
| 104 | G | A | -2.1749 | |
| 105 | M | A | -2.1679 | |
| 106 | Q | A | -2.7052 | |
| 107 | E | A | -2.9422 | |
| 108 | A | A | 0.0000 | |
| 109 | P | A | -2.5563 | |
| 110 | E | A | -2.6334 | |
| 111 | A | A | -1.4987 | |
| 112 | I | A | 0.0000 | |
| 113 | L | A | -1.4135 | |
| 114 | S | A | -1.2089 | |
| 115 | K | A | -1.7007 | |
| 116 | A | A | 0.0000 | |
| 117 | V | A | -1.0186 | |
| 118 | E | A | -1.8150 | |
| 119 | I | A | 0.0000 | |
| 120 | E | A | -1.8345 | |
| 121 | E | A | -2.6506 | |
| 122 | Q | A | -1.9025 | |
| 123 | T | A | 0.0000 | |
| 124 | K | A | -3.0009 | |
| 125 | R | A | -3.4710 | |
| 126 | L | A | 0.0000 | |
| 127 | L | A | 0.0000 | |
| 128 | E | A | -2.8086 | |
| 129 | G | A | 0.0000 | |
| 130 | M | A | 0.0000 | |
| 131 | E | A | -2.2032 | |
| 132 | L | A | -0.6691 | |
| 133 | I | A | 0.0000 | |
| 134 | V | A | 0.0000 | |
| 135 | S | A | -1.9011 | |
| 136 | Q | A | -1.3326 | |
| 137 | V | A | -0.4282 | |
| 138 | H | A | -1.5611 | |
| 139 | P | A | -2.0399 | |
| 140 | E | A | -2.8884 | |
| 141 | T | A | -2.8686 | |
| 142 | K | A | -3.4890 | |
| 143 | E | A | -3.4005 | |
| 144 | N | A | -2.1498 | |
| 145 | E | A | -0.9813 | |
| 146 | I | A | 1.7603 | |
| 147 | Y | A | 2.0478 | |
| 148 | P | A | 1.7299 | |
| 149 | V | A | 2.0782 | |
| 150 | W | A | 0.8765 | |
| 151 | S | A | 0.2365 | |
| 152 | G | A | -0.0280 | |
| 153 | L | A | -0.2647 | |
| 154 | P | A | -0.4005 | |
| 155 | S | A | -0.5220 | |
| 156 | L | A | -0.5528 | |
| 157 | Q | A | -1.3605 | |
| 158 | M | A | -1.3358 | |
| 159 | A | A | -1.5813 | |
| 160 | D | A | -2.9475 | |
| 161 | E | A | -2.7412 | |
| 162 | E | A | -2.4024 | |
| 163 | S | A | -1.8826 | |
| 164 | R | A | -1.7260 | |
| 165 | L | A | 0.0000 | |
| 166 | S | A | -0.5079 | |
| 167 | A | A | 0.0000 | |
| 168 | Y | A | 0.0000 | |
| 169 | Y | A | 0.0000 | |
| 170 | N | A | -0.4058 | |
| 171 | L | A | 0.0000 | |
| 172 | L | A | 0.0000 | |
| 173 | H | A | -1.2477 | |
| 174 | C | A | 0.0000 | |
| 175 | L | A | 0.0000 | |
| 176 | R | A | -2.6812 | |
| 177 | R | A | -2.8189 | |
| 178 | D | A | 0.0000 | |
| 179 | S | A | 0.0000 | |
| 180 | H | A | -1.9898 | |
| 181 | K | A | -1.8025 | |
| 182 | I | A | 0.0000 | |
| 183 | D | A | -1.0316 | |
| 184 | N | A | -1.4696 | |
| 185 | Y | A | 0.0000 | |
| 186 | L | A | 0.0000 | |
| 187 | K | A | -1.5936 | |
| 188 | L | A | -1.1020 | |
| 189 | L | A | -1.0468 | |
| 190 | K | A | -1.9047 | |
| 191 | C | A | -2.0361 | |
| 192 | R | A | -2.5193 | |
| 193 | I | A | -1.3042 | |
| 194 | I | A | -1.4259 | |
| 195 | H | A | -2.4186 | |
| 196 | N | A | -2.8291 | |
| 197 | N | A | -2.5491 | |
| 198 | N | A | -1.7832 | |
| 199 | C | A | -0.7102 |