| Chain sequence(s) |
B: GVEMLTLVSRGTVGPVTSLSVSDEGPVGTLTVTQRWVQGSVEAWLETRTF
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18)
[INFO] Main: Simulation completed successfully. (00:00:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | B | 0.4214 | |
| 2 | V | B | 1.2179 | |
| 3 | E | B | -0.5404 | |
| 4 | M | B | 0.6494 | |
| 5 | L | B | 1.5422 | |
| 6 | T | B | 1.1324 | |
| 7 | L | B | 1.4485 | |
| 8 | V | B | 0.3702 | |
| 9 | S | B | -0.6764 | |
| 10 | R | B | -2.1625 | |
| 11 | G | B | -1.4885 | |
| 12 | T | B | -0.4495 | |
| 13 | V | B | 0.4153 | |
| 14 | G | B | 0.0000 | |
| 15 | P | B | 0.4952 | |
| 16 | V | B | 1.6585 | |
| 17 | T | B | 0.6221 | |
| 18 | S | B | 1.0656 | |
| 19 | L | B | 2.2786 | |
| 20 | S | B | 1.4993 | |
| 21 | V | B | 1.3268 | |
| 22 | S | B | -0.6842 | |
| 23 | D | B | -2.2592 | |
| 24 | E | B | -2.5209 | |
| 25 | G | B | -1.4909 | |
| 26 | P | B | -0.4145 | |
| 27 | V | B | 0.3577 | |
| 28 | G | B | -0.8077 | |
| 29 | T | B | -0.0525 | |
| 30 | L | B | 1.2913 | |
| 31 | T | B | 1.0496 | |
| 32 | V | B | 1.3477 | |
| 33 | T | B | 0.5556 | |
| 34 | Q | B | 0.5379 | |
| 35 | R | B | -0.5751 | |
| 36 | W | B | 0.8682 | |
| 37 | V | B | 0.7588 | |
| 38 | Q | B | -0.6847 | |
| 39 | G | B | -0.7490 | |
| 40 | S | B | -0.8244 | |
| 41 | V | B | -0.8417 | |
| 42 | E | B | -1.7841 | |
| 43 | A | B | -0.4199 | |
| 44 | W | B | 0.6276 | |
| 45 | L | B | 1.7558 | |
| 46 | E | B | 0.5878 | |
| 47 | T | B | -0.0857 | |
| 48 | R | B | -0.6807 | |
| 49 | T | B | 0.1102 | |
| 50 | F | B | 1.5450 |