Project name: PET30a-AgSgNTm

Status: done

Started: 2026-06-14 08:59:54
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Chain sequence(s) A: MDEDTGENFANVFAQSLENSGAFSHEESQEYREIIQVLTRAFGSFPDLQKAPPGVLKATAAGFASAVAERTASDIEQGELFAKTRSVIQALREAFIVTTGVTNPYFISEVERLIEVFYITRGLEHHHHHH
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:05)
Show buried residues

Minimal score value
-3.9375
Maximal score value
2.1497
Average score
-1.0006
Total score value
-130.0781

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.7362
2 D A -3.0999
3 E A -3.8594
4 D A -3.9375
5 T A -2.8305
6 G A 0.0000
7 E A -3.6340
8 N A -2.2332
9 F A 0.0000
10 A A 0.0000
11 N A -1.6876
12 V A -0.5772
13 F A 0.0000
14 A A -2.2387
15 Q A -2.1779
16 S A -1.7705
17 L A 0.0000
18 E A -2.5485
19 N A -2.2440
20 S A -1.7342
21 G A -1.2582
22 A A -1.2263
23 F A 0.0000
24 S A -1.9470
25 H A -2.7716
26 E A -3.1991
27 E A -2.8560
28 S A 0.0000
29 Q A -3.4833
30 E A -3.1863
31 Y A 0.0000
32 R A -2.8076
33 E A -2.5686
34 I A 0.0000
35 I A 0.0000
36 Q A -1.6445
37 V A 0.2762
38 L A 0.0000
39 T A -1.1608
40 R A -1.2750
41 A A -0.1235
42 F A 0.4691
43 G A -0.4977
44 S A -1.6300
45 F A 0.0000
46 P A 0.0000
47 D A -1.7554
48 L A 0.0000
49 Q A -1.5148
50 K A -2.3487
51 A A -1.4307
52 P A -0.9557
53 P A -0.9735
54 G A -0.7219
55 V A -0.1422
56 L A 0.0000
57 K A -0.8533
58 A A -0.2660
59 T A 0.0000
60 A A 0.0000
61 A A -0.3051
62 G A 0.0618
63 F A 0.0000
64 A A 0.0000
65 S A -0.5047
66 A A -0.9189
67 V A 0.0000
68 A A 0.0000
69 E A -2.3721
70 R A -2.3840
71 T A 0.0000
72 A A -1.9428
73 S A -1.8502
74 D A -2.4932
75 I A -2.1401
76 E A -3.0676
77 Q A -2.5220
78 G A -1.8906
79 E A -2.7376
80 L A -1.4480
81 F A -0.3747
82 A A -0.9033
83 K A -0.9206
84 T A -1.2710
85 R A -2.1681
86 S A -1.5793
87 V A 0.0000
88 I A 0.0000
89 Q A -2.2007
90 A A 0.0000
91 L A 0.0000
92 R A -0.9188
93 E A -0.4730
94 A A 0.0000
95 F A 0.0000
96 I A 2.1086
97 V A 2.1497
98 T A 1.0113
99 T A 0.8237
100 G A 1.2213
101 V A 1.6819
102 T A 0.6673
103 N A 0.0000
104 P A 0.2844
105 Y A 0.8410
106 F A 0.0000
107 I A 0.0000
108 S A -0.7619
109 E A 0.0000
110 V A 0.0000
111 E A -2.8457
112 R A -2.5321
113 L A -1.1298
114 I A 0.0000
115 E A -1.5111
116 V A 0.1812
117 F A 0.4624
118 Y A 0.4106
119 I A 1.5211
120 T A 0.4871
121 R A -0.8326
122 G A -0.1542
123 L A -0.0842
124 E A -2.5067
125 H A -2.6593
126 H A -2.8579
127 H A -3.1080
128 H A -3.0519
129 H A -3.0060
130 H A -2.4020
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Laboratory of Theory of Biopolymers 2018