| Chain sequence(s) |
A: MDEDTGENFANVFAQSLENSGAFSHEESQEYREIIQVLTRAFGSFPDLQKAPPGVLKATAAGFASAVAERTASDIEQGELFAKTRSVIQALREAFIVTTGVTNPYFISEVERLIEVFYITRGLEHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:04)
[INFO] Main: Simulation completed successfully. (00:03:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.7362 | |
| 2 | D | A | -3.0999 | |
| 3 | E | A | -3.8594 | |
| 4 | D | A | -3.9375 | |
| 5 | T | A | -2.8305 | |
| 6 | G | A | 0.0000 | |
| 7 | E | A | -3.6340 | |
| 8 | N | A | -2.2332 | |
| 9 | F | A | 0.0000 | |
| 10 | A | A | 0.0000 | |
| 11 | N | A | -1.6876 | |
| 12 | V | A | -0.5772 | |
| 13 | F | A | 0.0000 | |
| 14 | A | A | -2.2387 | |
| 15 | Q | A | -2.1779 | |
| 16 | S | A | -1.7705 | |
| 17 | L | A | 0.0000 | |
| 18 | E | A | -2.5485 | |
| 19 | N | A | -2.2440 | |
| 20 | S | A | -1.7342 | |
| 21 | G | A | -1.2582 | |
| 22 | A | A | -1.2263 | |
| 23 | F | A | 0.0000 | |
| 24 | S | A | -1.9470 | |
| 25 | H | A | -2.7716 | |
| 26 | E | A | -3.1991 | |
| 27 | E | A | -2.8560 | |
| 28 | S | A | 0.0000 | |
| 29 | Q | A | -3.4833 | |
| 30 | E | A | -3.1863 | |
| 31 | Y | A | 0.0000 | |
| 32 | R | A | -2.8076 | |
| 33 | E | A | -2.5686 | |
| 34 | I | A | 0.0000 | |
| 35 | I | A | 0.0000 | |
| 36 | Q | A | -1.6445 | |
| 37 | V | A | 0.2762 | |
| 38 | L | A | 0.0000 | |
| 39 | T | A | -1.1608 | |
| 40 | R | A | -1.2750 | |
| 41 | A | A | -0.1235 | |
| 42 | F | A | 0.4691 | |
| 43 | G | A | -0.4977 | |
| 44 | S | A | -1.6300 | |
| 45 | F | A | 0.0000 | |
| 46 | P | A | 0.0000 | |
| 47 | D | A | -1.7554 | |
| 48 | L | A | 0.0000 | |
| 49 | Q | A | -1.5148 | |
| 50 | K | A | -2.3487 | |
| 51 | A | A | -1.4307 | |
| 52 | P | A | -0.9557 | |
| 53 | P | A | -0.9735 | |
| 54 | G | A | -0.7219 | |
| 55 | V | A | -0.1422 | |
| 56 | L | A | 0.0000 | |
| 57 | K | A | -0.8533 | |
| 58 | A | A | -0.2660 | |
| 59 | T | A | 0.0000 | |
| 60 | A | A | 0.0000 | |
| 61 | A | A | -0.3051 | |
| 62 | G | A | 0.0618 | |
| 63 | F | A | 0.0000 | |
| 64 | A | A | 0.0000 | |
| 65 | S | A | -0.5047 | |
| 66 | A | A | -0.9189 | |
| 67 | V | A | 0.0000 | |
| 68 | A | A | 0.0000 | |
| 69 | E | A | -2.3721 | |
| 70 | R | A | -2.3840 | |
| 71 | T | A | 0.0000 | |
| 72 | A | A | -1.9428 | |
| 73 | S | A | -1.8502 | |
| 74 | D | A | -2.4932 | |
| 75 | I | A | -2.1401 | |
| 76 | E | A | -3.0676 | |
| 77 | Q | A | -2.5220 | |
| 78 | G | A | -1.8906 | |
| 79 | E | A | -2.7376 | |
| 80 | L | A | -1.4480 | |
| 81 | F | A | -0.3747 | |
| 82 | A | A | -0.9033 | |
| 83 | K | A | -0.9206 | |
| 84 | T | A | -1.2710 | |
| 85 | R | A | -2.1681 | |
| 86 | S | A | -1.5793 | |
| 87 | V | A | 0.0000 | |
| 88 | I | A | 0.0000 | |
| 89 | Q | A | -2.2007 | |
| 90 | A | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | R | A | -0.9188 | |
| 93 | E | A | -0.4730 | |
| 94 | A | A | 0.0000 | |
| 95 | F | A | 0.0000 | |
| 96 | I | A | 2.1086 | |
| 97 | V | A | 2.1497 | |
| 98 | T | A | 1.0113 | |
| 99 | T | A | 0.8237 | |
| 100 | G | A | 1.2213 | |
| 101 | V | A | 1.6819 | |
| 102 | T | A | 0.6673 | |
| 103 | N | A | 0.0000 | |
| 104 | P | A | 0.2844 | |
| 105 | Y | A | 0.8410 | |
| 106 | F | A | 0.0000 | |
| 107 | I | A | 0.0000 | |
| 108 | S | A | -0.7619 | |
| 109 | E | A | 0.0000 | |
| 110 | V | A | 0.0000 | |
| 111 | E | A | -2.8457 | |
| 112 | R | A | -2.5321 | |
| 113 | L | A | -1.1298 | |
| 114 | I | A | 0.0000 | |
| 115 | E | A | -1.5111 | |
| 116 | V | A | 0.1812 | |
| 117 | F | A | 0.4624 | |
| 118 | Y | A | 0.4106 | |
| 119 | I | A | 1.5211 | |
| 120 | T | A | 0.4871 | |
| 121 | R | A | -0.8326 | |
| 122 | G | A | -0.1542 | |
| 123 | L | A | -0.0842 | |
| 124 | E | A | -2.5067 | |
| 125 | H | A | -2.6593 | |
| 126 | H | A | -2.8579 | |
| 127 | H | A | -3.1080 | |
| 128 | H | A | -3.0519 | |
| 129 | H | A | -3.0060 | |
| 130 | H | A | -2.4020 |