| Chain sequence(s) |
L: IVMTQSPDSLAVSLGERATINCKSSESVSNDVAWYQQKPGQPPKLLINYAFHRFTGVPDRFSGSGYGTDFTLTISSLQAEDVAVYYCHQAYSSPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:28)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:28)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:28)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:28)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:28)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:07)
[INFO] Main: Simulation completed successfully. (00:05:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | I | L | 0.8936 | |
| 3 | V | L | 1.8768 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.0480 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.1982 | |
| 8 | P | L | -0.4895 | |
| 9 | D | L | -1.8491 | |
| 10 | S | L | -0.6622 | |
| 11 | L | L | 0.2499 | |
| 12 | A | L | 0.0359 | |
| 13 | V | L | 0.1884 | |
| 14 | S | L | -0.0763 | |
| 15 | L | L | 0.6898 | |
| 16 | G | L | -0.3686 | |
| 17 | E | L | -1.9462 | |
| 18 | R | L | -2.1420 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.0375 | |
| 21 | I | L | 0.0000 | |
| 22 | N | L | -0.3550 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -1.4700 | |
| 25 | S | L | -0.3219 | |
| 26 | S | L | -0.5508 | |
| 27 | E | L | -1.8919 | |
| 28 | S | L | -0.5221 | |
| 29 | V | L | 0.0000 | |
| 30 | S | L | -0.1175 | |
| 31 | N | L | -0.3923 | |
| 32 | D | L | -0.7680 | |
| 33 | V | L | 0.0000 | |
| 34 | A | L | -0.0184 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.2733 | |
| 37 | Q | L | -0.1433 | |
| 38 | Q | L | -0.4186 | |
| 39 | K | L | -0.4897 | |
| 40 | P | L | -0.3822 | |
| 41 | G | L | -0.6653 | |
| 42 | Q | L | -0.9905 | |
| 43 | P | L | -0.4520 | |
| 44 | P | L | -0.5463 | |
| 45 | K | L | -1.2574 | |
| 46 | L | L | 0.0572 | |
| 47 | L | L | 0.0000 | |
| 48 | I | L | 0.0000 | |
| 49 | N | L | 0.0603 | |
| 50 | Y | L | 1.2824 | |
| 51 | A | L | 0.0000 | |
| 52 | F | L | 1.2535 | |
| 53 | H | L | -0.8789 | |
| 54 | R | L | -0.9140 | |
| 55 | F | L | 0.4379 | |
| 56 | T | L | -0.0460 | |
| 57 | G | L | -0.4794 | |
| 58 | V | L | 0.0000 | |
| 59 | P | L | -0.4933 | |
| 60 | D | L | -1.8731 | |
| 61 | R | L | -0.6308 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.1073 | |
| 64 | G | L | 0.1048 | |
| 65 | S | L | 0.0078 | |
| 66 | G | L | 0.1202 | |
| 67 | Y | L | 1.2859 | |
| 68 | G | L | 0.1516 | |
| 69 | T | L | -0.1839 | |
| 70 | D | L | -0.9164 | |
| 71 | F | L | 0.0000 | |
| 72 | T | L | -0.0581 | |
| 73 | L | L | 0.0000 | |
| 74 | T | L | -0.0220 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -0.3569 | |
| 77 | S | L | -0.1802 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -0.7565 | |
| 80 | A | L | -0.4086 | |
| 81 | E | L | -1.4961 | |
| 82 | D | L | 0.0000 | |
| 83 | V | L | 0.0000 | |
| 84 | A | L | 0.0000 | |
| 85 | V | L | -0.0235 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.2575 | |
| 88 | C | L | 0.0000 | |
| 89 | H | L | 0.1522 | |
| 90 | Q | L | 0.0000 | |
| 91 | A | L | 0.2311 | |
| 92 | Y | L | 1.0058 | |
| 93 | S | L | 0.0574 | |
| 94 | S | L | -0.1502 | |
| 95 | P | L | -0.0831 | |
| 96 | Y | L | 1.1855 | |
| 97 | T | L | 0.5738 | |
| 98 | F | L | 1.9208 | |
| 99 | G | L | 0.0000 | |
| 100 | Q | L | -1.1983 | |
| 101 | G | L | 0.0000 | |
| 102 | T | L | 0.0000 | |
| 103 | K | L | -1.4080 | |
| 104 | L | L | 0.0000 | |
| 105 | E | L | -0.9892 | |
| 106 | I | L | 0.0000 | |
| 107 | K | L | -1.3346 | |
| 108 | R | L | -0.8393 | |
| 109 | T | L | 0.1461 | |
| 110 | V | L | 1.7609 | |
| 111 | A | L | 0.3405 | |
| 112 | A | L | 0.0256 | |
| 113 | P | L | 0.0000 | |
| 114 | S | L | -0.1715 | |
| 115 | V | L | 0.3719 | |
| 116 | F | L | 1.1810 | |
| 117 | I | L | 0.6753 | |
| 118 | F | L | 1.1290 | |
| 119 | P | L | 0.1165 | |
| 120 | P | L | 0.0000 | |
| 121 | S | L | -0.4286 | |
| 122 | D | L | -2.1410 | |
| 123 | E | L | -2.2014 | |
| 124 | Q | L | -0.5819 | |
| 125 | L | L | -0.1270 | |
| 126 | K | L | -1.6952 | |
| 127 | S | L | -0.5547 | |
| 128 | G | L | -0.2162 | |
| 129 | T | L | -0.1577 | |
| 130 | A | L | 0.0000 | |
| 131 | S | L | -0.0518 | |
| 132 | V | L | 0.0000 | |
| 133 | V | L | 0.3880 | |
| 134 | C | L | 0.0000 | |
| 135 | L | L | 0.3380 | |
| 136 | L | L | 0.0000 | |
| 137 | N | L | -0.6567 | |
| 138 | N | L | -0.6654 | |
| 139 | F | L | 0.0000 | |
| 140 | Y | L | 0.0000 | |
| 141 | P | L | -0.3384 | |
| 142 | R | L | -1.9437 | |
| 143 | E | L | -2.1114 | |
| 144 | A | L | -0.6348 | |
| 145 | K | L | -1.6625 | |
| 146 | V | L | -0.1733 | |
| 147 | Q | L | -0.2507 | |
| 148 | W | L | 0.0000 | |
| 149 | K | L | -0.2775 | |
| 150 | V | L | 0.0000 | |
| 151 | D | L | -1.4671 | |
| 152 | N | L | -1.5224 | |
| 153 | A | L | 0.1004 | |
| 154 | L | L | 1.4656 | |
| 155 | Q | L | -0.0722 | |
| 156 | S | L | -0.3574 | |
| 157 | G | L | -0.7390 | |
| 158 | N | L | -1.3718 | |
| 159 | S | L | -0.5270 | |
| 160 | Q | L | -1.5496 | |
| 161 | E | L | -2.0822 | |
| 162 | S | L | -0.4934 | |
| 163 | V | L | 0.2775 | |
| 164 | T | L | -0.3426 | |
| 165 | E | L | -1.8310 | |
| 166 | Q | L | 0.0000 | |
| 167 | D | L | -1.0158 | |
| 168 | S | L | -0.7775 | |
| 169 | K | L | -1.7920 | |
| 170 | D | L | -0.7206 | |
| 171 | S | L | 0.0000 | |
| 172 | T | L | 0.0000 | |
| 173 | Y | L | 0.0000 | |
| 174 | S | L | -0.0950 | |
| 175 | L | L | 0.0000 | |
| 176 | S | L | -0.0286 | |
| 177 | S | L | 0.0000 | |
| 178 | T | L | 0.0345 | |
| 179 | L | L | 0.0000 | |
| 180 | T | L | -0.0197 | |
| 181 | L | L | 0.1201 | |
| 182 | S | L | -0.2310 | |
| 183 | K | L | -0.6577 | |
| 184 | A | L | -0.3177 | |
| 185 | D | L | -1.4047 | |
| 186 | Y | L | 0.0000 | |
| 187 | E | L | -2.0840 | |
| 188 | K | L | -2.0692 | |
| 189 | H | L | -0.7379 | |
| 190 | K | L | -0.9641 | |
| 191 | V | L | 0.2979 | |
| 192 | Y | L | 0.0000 | |
| 193 | A | L | -0.0244 | |
| 194 | C | L | 0.0000 | |
| 195 | E | L | -0.3724 | |
| 196 | V | L | 0.0000 | |
| 197 | T | L | -0.0704 | |
| 198 | H | L | 0.0000 | |
| 199 | Q | L | -1.2252 | |
| 200 | G | L | -0.3103 | |
| 201 | L | L | 0.2037 | |
| 202 | S | L | -0.2016 | |
| 203 | S | L | -0.2907 | |
| 204 | P | L | -0.1726 | |
| 205 | V | L | 0.4127 | |
| 206 | T | L | -0.2306 | |
| 207 | K | L | -1.2638 | |
| 208 | S | L | -0.3653 | |
| 209 | F | L | 0.0293 | |
| 210 | N | L | -0.8898 | |
| 211 | R | L | -0.7714 | |
| 212 | G | L | -0.8774 | |
| 213 | E | L | -1.7737 | |
| 214 | C | L | 0.4018 |