| Chain sequence(s) |
B: AAKEAETQQTYKTILNALKLKVRPVTPEQEAEAKAKAEALSKA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -1.4590 | |
| 2 | A | B | -2.0109 | |
| 3 | K | B | -3.4992 | |
| 4 | E | B | -3.6176 | |
| 5 | A | B | -2.9574 | |
| 6 | E | B | -3.7599 | |
| 7 | T | B | -2.7231 | |
| 8 | Q | B | -2.6307 | |
| 9 | Q | B | -2.7000 | |
| 10 | T | B | -1.0564 | |
| 11 | Y | B | 0.0803 | |
| 12 | K | B | -1.4567 | |
| 13 | T | B | -0.1079 | |
| 14 | I | B | 1.2858 | |
| 15 | L | B | 1.5274 | |
| 16 | N | B | -0.3362 | |
| 17 | A | B | 0.5028 | |
| 18 | L | B | 1.8759 | |
| 19 | K | B | 0.0362 | |
| 20 | L | B | 0.8331 | |
| 21 | K | B | -1.1168 | |
| 22 | V | B | 0.4887 | |
| 23 | R | B | -1.1785 | |
| 24 | P | B | -0.4229 | |
| 25 | V | B | 0.1864 | |
| 26 | T | B | -1.2752 | |
| 27 | P | B | -1.9280 | |
| 28 | E | B | -3.1505 | |
| 29 | Q | B | -3.2052 | |
| 30 | E | B | -3.2182 | |
| 31 | A | B | -3.4358 | |
| 32 | E | B | -4.1955 | |
| 33 | A | B | -3.3595 | |
| 34 | K | B | -3.9006 | |
| 35 | A | B | -3.2953 | |
| 36 | K | B | -3.3324 | |
| 37 | A | B | -2.2372 | |
| 38 | E | B | -3.0328 | |
| 39 | A | B | -1.8047 | |
| 40 | L | B | -0.3640 | |
| 41 | S | B | -1.1625 | |
| 42 | K | B | -1.8828 | |
| 43 | A | B | -0.5399 |