Project name: RVAC_17_03_2026 [mutate: SE11A]

Status: done

Started: 2026-03-17 19:37:10
Settings
Chain sequence(s) A: MDTPYANSTQSEPFLTSTLCLYYPTEAATEINDTEWKDTLSQLFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNIVLMKYDSNLELDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIGCLTTDTNTFEEVATAEKLVITDVVDGVNHKLDVTTNTCTIRNCKKLGPRENVAVIQVGGSNILDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVNQIVQVMSKRSRSLNSAAFYYRV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues SE11A
Energy difference between WT (input) and mutated protein (by FoldX) -0.326907 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:02:10)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:02:18)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:35)
Show buried residues

Minimal score value
-3.6325
Maximal score value
2.6881
Average score
-0.6045
Total score value
-159.583

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.1256
2 D A -1.1955
3 T A -0.4374
4 P A -0.2023
5 Y A 0.5259
6 A A -0.0867
7 N A -1.1812
8 S A -1.3415
9 T A -2.1296
10 Q A -2.9971
11 E A -3.1857 mutated: SE11A
12 E A -2.7769
13 P A -1.6889
14 F A 0.0315
15 L A 0.9451
16 T A 0.5179
17 S A 0.0000
18 T A 0.2402
19 L A 0.0000
20 C A 0.0000
21 L A 0.0000
22 Y A 0.0000
23 Y A 0.0000
24 P A 0.0000
25 T A -1.4474
26 E A -1.8880
27 A A 0.0000
28 A A -1.5480
29 T A -1.6773
30 E A -2.4848
31 I A 0.0000
32 N A -2.4070
33 D A -2.1584
34 T A -1.9504
35 E A -3.0484
36 W A 0.0000
37 K A -2.2221
38 D A -3.0341
39 T A -1.9410
40 L A 0.0000
41 S A -1.3797
42 Q A -1.4834
43 L A -0.6523
44 F A 0.0000
45 L A -0.0885
46 T A -0.2849
47 K A -0.8800
48 G A -0.2290
49 W A 0.0000
50 P A -0.0237
51 T A -0.4304
52 G A -0.2689
53 S A 0.0000
54 V A 0.3505
55 Y A 0.3961
56 F A -0.2623
57 K A -1.4709
58 E A -2.2633
59 Y A 0.0000
60 T A -0.8494
61 D A -0.8558
62 I A 0.0000
63 A A 0.0000
64 S A -0.5555
65 F A 0.0000
66 S A 0.0000
67 V A -0.3205
68 D A -1.8677
69 P A -1.1968
70 Q A -1.2465
71 L A 0.0000
72 Y A 0.8257
73 C A 0.0000
74 D A -1.1766
75 Y A 0.0000
76 N A 0.0000
77 I A 0.0000
78 V A 0.0000
79 L A 0.0000
80 M A 0.0000
81 K A -1.3145
82 Y A -1.1798
83 D A -1.9828
84 S A -1.8655
85 N A -2.0116
86 L A -2.1367
87 E A -2.8506
88 L A 0.0000
89 D A -2.8048
90 M A 0.0000
91 S A -1.4496
92 E A -1.9357
93 L A 0.0000
94 A A 0.0000
95 D A -1.8202
96 L A 0.0000
97 I A 0.0000
98 L A -1.1426
99 N A 0.0000
100 E A -0.8980
101 W A -0.0139
102 L A 0.8900
103 C A -0.2502
104 N A -1.5451
105 P A -1.5295
106 M A 0.0000
107 D A -1.0143
108 I A 0.1435
109 T A 0.6825
110 L A 2.0146
111 Y A 1.9758
112 Y A 1.1735
113 Y A 0.1427
114 Q A -1.2211
115 Q A 0.0000
116 T A -2.1392
117 D A -3.6325
118 E A -3.3634
119 A A -2.0618
120 N A 0.0000
121 K A -2.0977
122 W A 0.0000
123 I A 0.0000
124 S A 0.0000
125 M A -0.2142
126 G A -0.6939
127 S A -0.7844
128 S A -0.7907
129 C A 0.0000
130 T A -0.3881
131 I A 0.0000
132 K A -1.4226
133 V A 0.0000
134 C A 0.0000
135 P A 0.5340
136 L A 0.0000
137 N A -0.4393
138 T A -0.8064
139 Q A -1.1529
140 T A -0.0119
141 L A 0.9812
142 G A 1.2255
143 I A 2.1038
144 G A 0.6676
145 C A 0.6247
146 L A 1.4348
147 T A 0.6372
148 T A 0.0397
149 D A -0.5791
150 T A -1.2465
151 N A -1.8165
152 T A -1.1515
153 F A 0.0000
154 E A -2.5106
155 E A -1.8646
156 V A -0.1120
157 A A 0.0000
158 T A -0.4717
159 A A -0.4235
160 E A -1.0853
161 K A -1.3753
162 L A 0.0000
163 V A 0.0000
164 I A -0.1400
165 T A 0.0000
166 D A -1.8388
167 V A -0.7313
168 V A -0.1022
169 D A -2.4547
170 G A -1.3643
171 V A -0.3705
172 N A -0.4446
173 H A 0.0000
174 K A 0.2237
175 L A 0.0000
176 D A -1.1920
177 V A 0.0000
178 T A -0.6383
179 T A -0.9246
180 N A -1.3854
181 T A -0.8946
182 C A 0.0000
183 T A -0.5994
184 I A 0.0000
185 R A -1.4308
186 N A -1.3899
187 C A 0.0000
188 K A -1.4211
189 K A -0.9481
190 L A 0.4966
191 G A -0.2910
192 P A -1.1599
193 R A -1.5480
194 E A -2.3531
195 N A 0.0000
196 V A 0.0000
197 A A 0.0000
198 V A 0.0000
199 I A 0.0000
200 Q A 0.0000
201 V A 0.0000
202 G A -1.2072
203 G A -0.7661
204 S A -0.4248
205 N A -0.4876
206 I A 1.3233
207 L A 0.6958
208 D A -0.2981
209 I A 0.8701
210 T A 0.0186
211 A A -0.9773
212 D A -1.5409
213 P A -1.2542
214 T A -0.9061
215 T A -0.8606
216 A A -0.5933
217 P A -0.8895
218 Q A -1.9032
219 T A -1.5454
220 E A -2.4259
221 R A -1.6782
222 M A -0.8187
223 M A -0.2604
224 R A -0.3451
225 I A 0.0000
226 N A -1.6336
227 W A -1.1137
228 K A -2.2848
229 K A -2.4739
230 W A 0.0000
231 W A -0.5292
232 Q A -0.5529
233 V A 0.0000
234 F A 0.0000
235 Y A 0.3752
236 T A -0.0964
237 V A 0.0000
238 V A 0.0000
239 D A -1.3218
240 Y A -0.1883
241 V A 0.0000
242 N A -1.3852
243 Q A -1.1954
244 I A 0.0000
245 V A 0.0000
246 Q A -1.4727
247 V A -0.6182
248 M A 0.0000
249 S A -1.7765
250 K A -2.7820
251 R A -2.6003
252 S A -2.0165
253 R A -2.3825
254 S A -1.0298
255 L A 0.0963
256 N A -1.0622
257 S A -0.0972
258 A A 0.5532
259 A A 1.4387
260 F A 2.6881
261 Y A 2.5883
262 Y A 2.0490
263 R A 0.2185
264 V A 1.3882
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Laboratory of Theory of Biopolymers 2018