Project name: HV1

Status: done

Started: 2026-04-26 04:13:13
Settings
Chain sequence(s) H: IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLLVRIGKHSRTRYERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNRRETWTTSVAEVQPSVLQVVNLPLVERPVCKASTRIRITDNMFCAGYKPGEGKRGDACEGDSGGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDRLGS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:09:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:09:26)
Show buried residues

Minimal score value
-3.3362
Maximal score value
0.7926
Average score
-0.8805
Total score value
-228.0407

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I H 0.0000
2 V H 0.0000
3 E H -2.8506
4 G H -2.1997
5 Q H -2.8123
6 D H -2.6866
7 A H 0.0000
8 E H -1.4697
9 V H 0.4897
10 G H -0.2244
11 L H -0.2269
12 S H 0.0000
13 P H -0.3270
14 W H 0.0000
15 Q H 0.0000
16 V H 0.0000
17 M H 0.0000
18 L H 0.0000
19 F H -0.7748
20 R H -1.7317
21 K H -2.0761
22A S H -1.7746
23 P H -1.8205
24 Q H -2.5047
25 E H -2.5806
26 L H -0.9634
27 L H -0.5481
28 C H 0.0000
29 G H 0.0000
30 A H 0.0000
31 S H 0.0000
32 L H 0.0000
33 I H -0.0774
34 S H -0.4977
35 D H -1.3432
36 R H -2.0257
37 W H 0.0000
38 V H 0.0000
39 L H 0.0000
40 T H 0.0000
41 A H 0.0000
42 A H 0.0000
43 H H 0.0441
44 C H 0.0000
45 L H 0.0000
46 L H -0.3837
47A Y H -0.4793
48B P H -0.9062
49C P H -0.5796
50D W H -0.0516
51E D H -1.7206
52F K H -1.4289
53G N H -1.5790
54H F H -0.9106
55I T H -0.8359
56 V H -0.9335
57 D H -1.8185
58 D H -1.4738
59 L H 0.0000
60 L H -0.0385
61 V H 0.0000
62 R H 0.0155
63 I H 0.0000
64 G H 0.0000
65 K H 0.0000
66 H H -0.3816
67 S H 0.0000
68 R H -0.9925
69 T H -1.2592
70 R H -1.8254
71 Y H -0.9444
72 E H 0.0000
73A R H -2.7048
74 K H -2.5244
75 V H -1.4544
76 E H 0.0000
77 K H -1.1636
78 I H 0.1994
79 S H 0.0000
80 M H -0.3613
81 L H 0.0000
82 D H -1.7787
83 K H -1.0485
84 I H 0.2024
85 Y H 0.5649
86 I H 0.2214
87 H H -0.7098
88 P H -1.1365
89 R H -2.0800
90 Y H 0.0000
91 N H -1.7693
92 W H -1.3980
93 K H -2.4918
94A E H -2.7951
95 N H 0.0000
96 L H -1.0672
97 D H 0.0000
98 R H -1.3818
99 D H 0.0000
100 I H 0.0000
101 A H 0.0000
102 L H 0.0000
103 L H 0.0000
104 K H -1.4375
105 L H 0.0000
106 K H -2.4314
107 R H -2.1807
108 P H -1.8179
109 I H 0.0000
110 E H -1.9896
111 L H -0.8844
112 S H -1.2373
113 D H -1.4999
114 Y H -0.4262
115 I H 0.0000
116 H H -1.3350
117 P H -0.3526
118 V H 0.0000
119 C H -0.3104
120 L H -0.0537
121 P H 0.0000
122 D H -2.4753
123 K H -3.0098
124 Q H -2.7268
125 T H 0.0000
126 A H 0.0000
127A A H -1.7804
128B K H -2.2348
129C L H 0.0000
130 L H -0.5264
131 H H -1.3108
132 A H -0.9872
133 G H -0.6853
134 F H -0.2932
135 K H -1.4891
136 G H 0.0000
137 R H -0.9059
138 V H 0.0000
139 T H 0.0000
140 G H 0.0000
141 W H 0.0000
142 G H 0.0000
143 N H 0.0000
144 R H -3.2511
145 R H -3.1896
146 E H -1.6040
147 T H -0.5020
148 W H 0.7926
149 T H 0.4271
150A T H 0.3833
151B S H -0.1081
152C V H 0.6224
153D A H -0.8433
154E E H -2.0540
155 V H 0.0000
156 Q H -2.3017
157 P H -1.5047
158 S H -0.9326
159 V H -0.9121
160 L H 0.0000
161 Q H 0.0000
162 V H 0.0000
163 V H 0.0000
164 N H -1.3019
165 L H 0.0000
166 P H 0.0000
167 L H 0.0000
168 V H -1.0959
169 E H -2.2618
170 R H -1.9400
171 P H -1.2961
172 V H -0.9917
173 C H 0.0000
174 K H -2.2902
175 A H -0.9717
176 S H -1.1100
177 T H -1.6223
178 R H -2.4130
179 I H -1.9614
180 R H -2.5631
181 I H -1.6978
182 T H -1.2508
183 D H -1.8513
184 N H 0.0000
185 M H 0.0000
186 F H -0.4228
187 C H 0.0000
188 A H 0.0000
189 G H 0.0000
190A Y H -2.2276
191 K H -2.4560
192 P H -2.6465
193A G H -2.5347
194B E H -3.2745
195C G H -2.7149
196D K H -3.3362
197 R H -3.2346
198 G H 0.0000
199 D H 0.0000
200 A H -0.9975
201 C H -1.7830
202 E H -2.4224
203 G H -0.9119
204 D H 0.0000
205 S H -0.4633
206 G H 0.0000
207 G H 0.0000
208 P H 0.0000
209 F H 0.0000
210 V H 0.0000
211 M H 0.0000
212 K H -2.0859
213 S H 0.0000
214 P H -0.6958
215A Y H -0.0479
216B N H -1.1211
217 N H -2.3235
218 R H -2.5422
219 W H -1.3725
220 Y H 0.0000
221 Q H 0.0000
222 M H 0.0000
223 G H 0.0000
224 I H 0.0000
225 V H 0.0000
226 S H 0.0000
227 W H -0.4142
228 G H -1.1306
229 E H -1.2663
230 G H -1.5822
231 C H -1.7404
232 D H -2.1260
233A R H -2.5475
234 D H -2.8729
235 G H -1.8243
236 K H -1.7452
237 Y H 0.0000
238 G H 0.0000
239 F H 0.0000
240 Y H 0.0000
241 T H 0.0000
242 H H -0.9012
243 V H 0.0000
244 F H -1.3639
245 R H -2.4561
246 L H 0.0000
247 K H -2.1777
248 K H -2.8485
249 W H 0.0000
250 I H 0.0000
251 Q H -2.5160
252 K H -2.7120
253 V H 0.0000
254 I H -0.7274
255 D H -1.6356
256 R H -1.9309
257 L H 0.1457
258 G H -0.8836
259 S H -1.0044
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Laboratory of Theory of Biopolymers 2018