| Chain sequence(s) |
A: MSHHHHHHSGSPISEEEKKKIEEGWETGLMWMEFPSGKEILVDQRQIYLVEGEQIEEVKHEPTKESFIKKLEELIIELSGNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:18)
[INFO] Main: Simulation completed successfully. (00:03:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5373 | |
| 2 | S | A | -0.6363 | |
| 3 | H | A | -1.7531 | |
| 4 | H | A | -2.3629 | |
| 5 | H | A | -2.7986 | |
| 6 | H | A | -2.8005 | |
| 7 | H | A | -2.6054 | |
| 8 | H | A | -2.2381 | |
| 9 | S | A | -1.5284 | |
| 10 | G | A | -1.2399 | |
| 11 | S | A | -1.0284 | |
| 12 | P | A | -0.8783 | |
| 13 | I | A | 0.0000 | |
| 14 | S | A | -2.3697 | |
| 15 | E | A | -3.6156 | |
| 16 | E | A | -3.9471 | |
| 17 | E | A | -3.3666 | |
| 18 | K | A | -3.7671 | |
| 19 | K | A | -4.4168 | |
| 20 | K | A | -3.4851 | |
| 21 | I | A | 0.0000 | |
| 22 | E | A | -4.1318 | |
| 23 | E | A | -3.7030 | |
| 24 | G | A | 0.0000 | |
| 25 | W | A | -2.7481 | |
| 26 | E | A | -3.0363 | |
| 27 | T | A | -1.5900 | |
| 28 | G | A | 0.0000 | |
| 29 | L | A | 0.1448 | |
| 30 | M | A | 0.0000 | |
| 31 | W | A | 0.4446 | |
| 32 | M | A | 0.0000 | |
| 33 | E | A | -2.0757 | |
| 34 | F | A | 0.0000 | |
| 35 | P | A | -1.2935 | |
| 36 | S | A | -1.4925 | |
| 37 | G | A | -1.6668 | |
| 38 | K | A | -1.9415 | |
| 39 | E | A | -1.2667 | |
| 40 | I | A | 0.0000 | |
| 41 | L | A | -0.0905 | |
| 42 | V | A | 0.0000 | |
| 43 | D | A | -0.9992 | |
| 44 | Q | A | -1.9273 | |
| 45 | R | A | -2.0521 | |
| 46 | Q | A | -2.3370 | |
| 47 | I | A | 0.0000 | |
| 48 | Y | A | -1.1915 | |
| 49 | L | A | -0.6241 | |
| 50 | V | A | 0.0000 | |
| 51 | E | A | -2.2839 | |
| 52 | G | A | -2.1161 | |
| 53 | E | A | -2.4322 | |
| 54 | Q | A | -1.9731 | |
| 55 | I | A | -0.4301 | |
| 56 | E | A | -2.0488 | |
| 57 | E | A | -2.4388 | |
| 58 | V | A | -1.6893 | |
| 59 | K | A | -2.9280 | |
| 60 | H | A | -2.8936 | |
| 61 | E | A | -2.9407 | |
| 62 | P | A | -2.1028 | |
| 63 | T | A | -1.9779 | |
| 64 | K | A | -2.8678 | |
| 65 | E | A | -3.0061 | |
| 66 | S | A | -2.7213 | |
| 67 | F | A | 0.0000 | |
| 68 | I | A | -2.2676 | |
| 69 | K | A | -3.0649 | |
| 70 | K | A | -2.6816 | |
| 71 | L | A | 0.0000 | |
| 72 | E | A | -2.2107 | |
| 73 | E | A | -2.7246 | |
| 74 | L | A | -1.5961 | |
| 75 | I | A | 0.0000 | |
| 76 | I | A | -1.0662 | |
| 77 | E | A | -2.3823 | |
| 78 | L | A | 0.0000 | |
| 79 | S | A | -1.3483 | |
| 80 | G | A | -1.5953 | |
| 81 | N | A | -2.0392 | |
| 82 | S | A | -1.4170 |