| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFSDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTSYQHCGADDRVSFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGHPLPDAPPPSPLYTPPPPTSPYAVRPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQCCTPVPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9411 | |
| 2 | L | A | 1.9607 | |
| 3 | P | A | 0.8344 | |
| 4 | P | A | 0.3766 | |
| 5 | T | A | 0.1210 | |
| 6 | T | A | 0.1270 | |
| 7 | P | A | 0.1829 | |
| 8 | V | A | 1.2122 | |
| 9 | A | A | 0.0816 | |
| 10 | K | A | -1.0399 | |
| 11 | V | A | -0.1878 | |
| 12 | Q | A | -1.4235 | |
| 13 | S | A | -1.5597 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4224 | |
| 16 | E | A | -2.4426 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4615 | |
| 20 | P | A | 0.1299 | |
| 21 | T | A | 0.1642 | |
| 22 | S | A | -0.0912 | |
| 23 | L | A | 0.1088 | |
| 24 | F | A | -0.0262 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2838 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8961 | |
| 31 | R | A | -2.6787 | |
| 32 | L | A | -0.7897 | |
| 33 | L | A | 1.1637 | |
| 34 | T | A | 1.3609 | |
| 35 | V | A | 1.7980 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2264 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1355 | |
| 40 | S | A | -0.1048 | |
| 41 | D | A | 0.0627 | |
| 42 | I | A | 1.8171 | |
| 43 | V | A | 2.4838 | |
| 44 | V | A | 1.7092 | |
| 45 | N | A | -0.5241 | |
| 46 | G | A | -0.3372 | |
| 47 | K | A | -0.1047 | |
| 48 | V | A | 2.2246 | |
| 49 | L | A | 2.5698 | |
| 50 | V | A | 1.6857 | |
| 51 | P | A | 0.6474 | |
| 52 | K | A | -0.1195 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1232 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3860 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2638 | |
| 70 | K | A | -1.7810 | |
| 71 | F | A | -0.6261 | |
| 72 | A | A | -0.5749 | |
| 73 | L | A | -0.8617 | |
| 74 | P | A | -1.1987 | |
| 75 | Q | A | -2.5059 | |
| 76 | K | A | -3.1100 | |
| 77 | D | A | -2.9943 | |
| 78 | F | A | -1.6694 | |
| 79 | Y | A | -1.9025 | |
| 80 | D | A | -2.7042 | |
| 81 | P | A | -2.3154 | |
| 82 | E | A | -3.0614 | |
| 83 | K | A | -3.4041 | |
| 84 | E | A | -2.4721 | |
| 85 | R | A | -1.3058 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6807 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9506 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3441 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6922 | |
| 99 | G | A | -0.5349 | |
| 100 | P | A | -0.4028 | |
| 101 | L | A | 0.0463 | |
| 102 | G | A | -0.2201 | |
| 103 | K | A | -0.6765 | |
| 104 | G | A | -0.5057 | |
| 105 | S | A | -0.5462 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0692 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3204 | |
| 110 | L | A | 0.3173 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1208 | |
| 113 | K | A | -0.4292 | |
| 114 | L | A | -0.9001 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4043 | |
| 117 | T | A | -0.9443 | |
| 118 | E | A | -1.9740 | |
| 119 | N | A | -2.0899 | |
| 120 | P | A | -1.4837 | |
| 121 | T | A | -0.8136 | |
| 122 | S | A | -0.5135 | |
| 123 | Y | A | 0.2886 | |
| 124 | Q | A | -0.4872 | |
| 125 | H | A | -0.4266 | |
| 126 | C | A | -0.8574 | |
| 127 | G | A | -1.2639 | |
| 128 | A | A | -1.1857 | |
| 129 | D | A | -2.1928 | |
| 130 | D | A | -1.7054 | |
| 131 | R | A | -1.1853 | |
| 132 | V | A | 0.0947 | |
| 133 | S | A | 0.1940 | |
| 134 | F | A | 0.1550 | |
| 135 | S | A | -0.1704 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6157 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2403 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5715 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2000 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1477 | |
| 157 | D | A | 0.3066 | |
| 158 | L | A | 0.7752 | |
| 159 | A | A | 0.1599 | |
| 160 | E | A | -1.4615 | |
| 161 | P | A | -0.2084 | |
| 162 | C | A | 0.1948 | |
| 163 | P | A | -0.1638 | |
| 164 | G | A | -0.0626 | |
| 165 | L | A | 0.6258 | |
| 166 | P | A | -0.1029 | |
| 167 | P | A | -0.3344 | |
| 168 | G | A | -0.4251 | |
| 169 | A | A | -0.0311 | |
| 170 | C | A | 0.6494 | |
| 171 | P | A | 0.5209 | |
| 172 | P | A | 0.7471 | |
| 173 | I | A | 1.9925 | |
| 174 | Q | A | 0.8395 | |
| 175 | L | A | 1.4891 | |
| 176 | V | A | 0.8543 | |
| 177 | N | A | -0.3002 | |
| 178 | S | A | 0.0304 | |
| 179 | V | A | 0.4304 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3821 | |
| 182 | D | A | 0.0814 | |
| 183 | G | A | -0.1619 | |
| 184 | D | A | -0.5363 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1226 | |
| 190 | F | A | 0.0687 | |
| 191 | G | A | -0.1014 | |
| 192 | N | A | -0.2536 | |
| 193 | M | A | -0.1138 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4070 | |
| 197 | E | A | -2.6429 | |
| 198 | L | A | -1.2468 | |
| 199 | Q | A | -2.5709 | |
| 200 | Q | A | -3.3245 | |
| 201 | D | A | -3.5953 | |
| 202 | R | A | -3.3248 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4382 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3489 | |
| 211 | S | A | -1.7082 | |
| 212 | T | A | -1.4279 | |
| 213 | R | A | -2.0690 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1577 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3419 | |
| 220 | L | A | 0.6013 | |
| 221 | K | A | -1.1281 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8135 | |
| 224 | N | A | -1.4936 | |
| 225 | E | A | -1.2272 | |
| 226 | A | A | -0.5991 | |
| 227 | Y | A | -0.3522 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6616 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0806 | |
| 234 | F | A | 0.2591 | |
| 235 | G | A | -0.8322 | |
| 236 | R | A | -2.6197 | |
| 237 | R | A | -2.9269 | |
| 238 | E | A | -2.1557 | |
| 239 | Q | A | -0.2031 | |
| 240 | V | A | 1.2724 | |
| 241 | Y | A | 1.2216 | |
| 242 | A | A | 0.1658 | |
| 243 | R | A | -1.2354 | |
| 244 | H | A | -1.0736 | |
| 245 | F | A | -0.0526 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4326 | |
| 249 | C | A | -0.8621 | |
| 250 | G | A | -0.9924 | |
| 251 | P | A | -0.8426 | |
| 252 | D | A | -1.2555 | |
| 253 | G | A | -1.2648 | |
| 254 | H | A | -1.4138 | |
| 255 | P | A | -1.2065 | |
| 256 | L | A | -0.4206 | |
| 257 | P | A | -0.9273 | |
| 258 | D | A | -1.7467 | |
| 259 | A | A | -0.8895 | |
| 260 | P | A | -0.9668 | |
| 261 | P | A | -0.6346 | |
| 262 | P | A | -0.3242 | |
| 263 | S | A | -0.2057 | |
| 264 | P | A | 0.3980 | |
| 265 | L | A | 1.2955 | |
| 266 | Y | A | 0.6420 | |
| 267 | T | A | 0.0873 | |
| 268 | P | A | -0.2373 | |
| 269 | P | A | 0.0972 | |
| 270 | P | A | -0.3133 | |
| 271 | P | A | -0.0667 | |
| 272 | T | A | 0.0226 | |
| 273 | S | A | 0.3215 | |
| 274 | P | A | 0.5108 | |
| 275 | Y | A | 1.2788 | |
| 276 | A | A | 0.9522 | |
| 277 | V | A | 1.5873 | |
| 278 | R | A | 0.3897 | |
| 279 | P | A | -0.0565 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | -0.1257 | |
| 282 | D | A | -0.5686 | |
| 283 | Y | A | 1.0021 | |
| 284 | F | A | 0.7686 | |
| 285 | G | A | 0.1979 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8764 | |
| 291 | L | A | 1.4446 | |
| 292 | V | A | 0.6144 | |
| 293 | S | A | -0.1669 | |
| 294 | S | A | -0.9619 | |
| 295 | D | A | -1.8444 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1118 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6213 | |
| 301 | R | A | -1.8170 | |
| 302 | P | A | -0.9692 | |
| 303 | F | A | -0.1948 | |
| 304 | W | A | -0.5693 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0895 | |
| 307 | R | A | -2.8324 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2504 | |
| 310 | G | A | -1.2120 | |
| 311 | N | A | -1.2680 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8196 | |
| 319 | N | A | -0.9287 | |
| 320 | E | A | -1.0340 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3448 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0957 | |
| 333 | N | A | 0.5648 | |
| 334 | F | A | 1.8171 | |
| 335 | T | A | 0.8286 | |
| 336 | I | A | 0.4281 | |
| 337 | S | A | -1.2003 | |
| 338 | Q | A | -2.1932 | |
| 339 | Q | A | -1.8162 | |
| 340 | C | A | -0.3965 | |
| 341 | C | A | 0.1603 | |
| 342 | T | A | 0.3965 | |
| 343 | P | A | 0.3615 | |
| 344 | V | A | 1.4672 | |
| 345 | P | A | 0.7328 | |
| 346 | N | A | 0.1302 | |
| 347 | V | A | 1.7937 | |
| 348 | Y | A | 1.6646 | |
| 349 | D | A | 0.1633 | |
| 350 | P | A | -0.6393 | |
| 351 | S | A | -0.6367 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -1.4743 | |
| 354 | K | A | -2.5430 | |
| 355 | N | A | -1.9200 | |
| 356 | Y | A | 0.0087 | |
| 357 | L | A | 0.7559 | |
| 358 | R | A | 1.0135 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3769 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0715 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0271 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6835 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3047 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3173 | |
| 376 | L | A | -1.7140 | |
| 377 | D | A | -1.9877 | |
| 378 | P | A | -1.0362 | |
| 379 | G | A | -1.0148 | |
| 380 | V | A | -0.9374 | |
| 381 | L | A | -0.5346 | |
| 382 | A | A | -0.6602 | |
| 383 | H | A | -0.8154 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4240 | |
| 386 | T | A | -0.5599 | |
| 387 | M | A | -0.3043 | |
| 388 | N | A | -0.8687 | |
| 389 | P | A | -1.2508 | |
| 390 | T | A | -1.4536 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4608 | |
| 393 | E | A | -2.7994 | |
| 394 | N | A | -2.4073 | |
| 395 | W | A | -1.3988 | |
| 396 | N | A | -1.1664 | |
| 397 | L | A | -0.2342 | |
| 398 | G | A | 0.4852 | |
| 399 | F | A | 2.4080 | |
| 400 | V | A | 1.8194 | |
| 401 | P | A | 0.0436 | |
| 402 | P | A | -1.8622 | |
| 403 | K | A | -3.3275 | |
| 404 | E | A | -3.8007 | |
| 405 | R | A | -3.9686 | |
| 406 | E | A | -3.8238 | |
| 407 | D | A | -2.9075 | |
| 408 | P | A | -1.7846 | |
| 409 | Y | A | -0.9977 | |
| 410 | K | A | -2.1281 | |
| 411 | G | A | -0.6388 | |
| 412 | L | A | 0.6735 | |
| 413 | I | A | 1.5864 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3987 | |
| 416 | E | A | -1.6923 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9420 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0428 | |
| 421 | E | A | -2.7776 | |
| 422 | R | A | -2.6295 | |
| 423 | F | A | -1.2735 | |
| 424 | S | A | -1.4506 | |
| 425 | Q | A | -1.8104 | |
| 426 | D | A | -2.9505 | |
| 427 | L | A | -2.1624 | |
| 428 | D | A | -3.0195 | |
| 429 | Q | A | -2.7526 | |
| 430 | F | A | -1.6297 | |
| 431 | A | A | -1.1621 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.3497 | |
| 435 | K | A | -1.1240 | |
| 436 | F | A | -0.1314 | |
| 437 | L | A | 0.7631 | |
| 438 | Y | A | 0.6061 | |
| 439 | Q | A | -0.4013 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine