| Chain sequence(s) |
A: MIPRGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVLASTNYYIKVRAGDNKYMHLKVFNGPPGQNADRVLTGYQVDKNKDDELTGF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:37)
[INFO] Main: Simulation completed successfully. (00:03:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.6982 | |
| 2 | I | A | 1.8262 | |
| 3 | P | A | 0.3137 | |
| 4 | R | A | -0.9495 | |
| 5 | G | A | -0.9833 | |
| 6 | L | A | -0.6646 | |
| 7 | S | A | -1.0437 | |
| 8 | E | A | -2.1288 | |
| 9 | A | A | -1.7028 | |
| 10 | K | A | -1.5477 | |
| 11 | P | A | -0.9281 | |
| 12 | A | A | -0.9208 | |
| 13 | T | A | -1.2832 | |
| 14 | P | A | -1.7916 | |
| 15 | E | A | -2.8985 | |
| 16 | I | A | 0.0000 | |
| 17 | Q | A | -2.8413 | |
| 18 | E | A | -3.9038 | |
| 19 | I | A | 0.0000 | |
| 20 | V | A | 0.0000 | |
| 21 | D | A | -4.0288 | |
| 22 | K | A | -3.3222 | |
| 23 | V | A | 0.0000 | |
| 24 | K | A | -2.5375 | |
| 25 | P | A | -2.1315 | |
| 26 | Q | A | -2.0322 | |
| 27 | L | A | 0.0000 | |
| 28 | E | A | -3.0369 | |
| 29 | E | A | -3.7059 | |
| 30 | K | A | -3.2039 | |
| 31 | T | A | -2.5232 | |
| 32 | N | A | -3.3783 | |
| 33 | E | A | -3.2823 | |
| 34 | T | A | -1.9764 | |
| 35 | Y | A | 0.0000 | |
| 36 | G | A | -1.6989 | |
| 37 | K | A | -2.6992 | |
| 38 | L | A | 0.0000 | |
| 39 | E | A | -2.3313 | |
| 40 | A | A | -1.6307 | |
| 41 | V | A | -0.6195 | |
| 42 | Q | A | -1.3664 | |
| 43 | Y | A | 0.0000 | |
| 44 | K | A | 0.0000 | |
| 45 | T | A | -0.1182 | |
| 46 | Q | A | 0.2661 | |
| 47 | V | A | 1.6733 | |
| 48 | L | A | 1.3049 | |
| 49 | A | A | 0.7851 | |
| 50 | S | A | 0.7562 | |
| 51 | T | A | 0.8056 | |
| 52 | N | A | 0.5526 | |
| 53 | Y | A | 0.2261 | |
| 54 | Y | A | 0.0000 | |
| 55 | I | A | 0.0000 | |
| 56 | K | A | 0.0000 | |
| 57 | V | A | 0.0000 | |
| 58 | R | A | -2.8025 | |
| 59 | A | A | -2.2194 | |
| 60 | G | A | -2.4962 | |
| 61 | D | A | -2.9095 | |
| 62 | N | A | -3.7105 | |
| 63 | K | A | -3.4126 | |
| 64 | Y | A | 0.0000 | |
| 65 | M | A | 0.0000 | |
| 66 | H | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | K | A | 0.0380 | |
| 69 | V | A | 0.0000 | |
| 70 | F | A | 0.1862 | |
| 71 | N | A | -0.5160 | |
| 72 | G | A | -0.9986 | |
| 73 | P | A | -0.8540 | |
| 74 | P | A | -1.0600 | |
| 75 | G | A | -1.4767 | |
| 76 | Q | A | -2.4226 | |
| 77 | N | A | -2.6746 | |
| 78 | A | A | -2.1363 | |
| 79 | D | A | -2.6280 | |
| 80 | R | A | -1.5834 | |
| 81 | V | A | -0.2385 | |
| 82 | L | A | 0.0000 | |
| 83 | T | A | 0.1602 | |
| 84 | G | A | 0.1222 | |
| 85 | Y | A | 0.2295 | |
| 86 | Q | A | -0.3032 | |
| 87 | V | A | -0.5126 | |
| 88 | D | A | -2.3710 | |
| 89 | K | A | -3.2410 | |
| 90 | N | A | -4.2122 | |
| 91 | K | A | -4.2182 | |
| 92 | D | A | -3.7650 | |
| 93 | D | A | -3.4291 | |
| 94 | E | A | -3.0898 | |
| 95 | L | A | 0.0000 | |
| 96 | T | A | -0.5369 | |
| 97 | G | A | -0.1415 | |
| 98 | F | A | 0.8699 |