Project name: 216bf7172378ead

Status: done

Started: 2026-05-12 16:30:20
Settings
Chain sequence(s) A: VLGAFSDGLAHLDNLKGTFATLSELYGRKKRRQRRR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:23)
Show buried residues

Minimal score value
-5.8822
Maximal score value
2.6921
Average score
-1.4114
Total score value
-50.8115

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 2.6921
2 L A 2.5642
3 G A 1.0709
4 A A 1.3157
5 F A 2.2735
6 S A 0.7079
7 D A -0.9556
8 G A -0.2017
9 L A 0.4441
10 A A -0.9507
11 H A -1.3978
12 L A -0.5878
13 D A -2.1903
14 N A -1.8424
15 L A -0.3034
16 K A -1.4704
17 G A -0.9892
18 T A 0.0364
19 F A 1.0934
20 A A 0.2701
21 T A 0.2565
22 L A 0.7015
23 S A -0.1354
24 E A -1.6571
25 L A -0.8349
26 Y A -0.9011
27 G A -2.5466
28 R A -4.1316
29 K A -4.7678
30 K A -5.4006
31 R A -5.7265
32 R A -5.8822
33 Q A -5.7831
34 R A -5.7536
35 R A -5.3240
36 R A -4.5040
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Laboratory of Theory of Biopolymers 2018