Project name: PZL-test

Status: done

Started: 2026-05-28 11:42:00
Settings
Chain sequence(s) A: TTCCPSIVARSNFNVCRLPGTPEAICATYTGCIIIPGATCPGDYAN
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-1.8188
Maximal score value
2.3124
Average score
0.1075
Total score value
4.947

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 T A -0.0672
2 T A 0.1310
3 C A 0.0000
4 C A 0.0000
5 P A -0.0980
6 S A 0.2441
7 I A 2.3124
8 V A 2.1341
9 A A 0.0000
10 R A -0.4194
11 S A -0.4174
12 N A -1.0118
13 F A 0.0000
14 N A -0.9517
15 V A 1.5584
16 C A 0.2631
17 R A -0.5089
18 L A 1.3551
19 P A -0.0551
20 G A -0.5155
21 T A -0.1453
22 P A -0.3806
23 E A -0.6958
24 A A 0.3059
25 I A 2.0233
26 C A 0.0000
27 A A -0.0073
28 T A 0.1756
29 Y A 1.3003
30 T A 0.1748
31 G A -0.3013
32 C A 0.0000
33 I A 0.7915
34 I A 1.4021
35 I A 0.4999
36 P A -0.2666
37 G A -0.4344
38 A A -0.0280
39 T A -0.0158
40 C A 0.2005
41 P A -0.1774
42 G A -0.8178
43 D A -1.8188
44 Y A -0.0184
45 A A -0.0233
46 N A -0.7493
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Laboratory of Theory of Biopolymers 2018