| Chain sequence(s) |
H: QVQLQQPGAELVKPGASVKLSCKASGYTFTTFWMHWVKQRPGRGLEWIGRIAPNSGDTKYNEKFKSKATLTADKSSSTAYMQLSSLTSEDSAVYYCARPDYWGQGTTLTVSS
L: DIQMTQSPSSLSASLGERVSLTCRASQKINGFLSWLQQKPDGTIKRLINAAAILDSGVPKRFSGSRSGSDYSLTISSLKSEDFADYYCLQYASYPWTFGGGTTLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:42)
[INFO] Main: Simulation completed successfully. (00:01:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.5200 | |
| 2 | V | H | -0.9038 | |
| 3 | Q | H | -1.7610 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.0995 | |
| 6 | Q | H | 0.0000 | |
| 7 | P | H | -0.9881 | |
| 8 | G | H | -0.9277 | |
| 9 | A | H | -0.2617 | |
| 11 | E | H | -0.3852 | |
| 12 | L | H | 0.8109 | |
| 13 | V | H | -0.2568 | |
| 14 | K | H | -1.6340 | |
| 15 | P | H | -1.3066 | |
| 16 | G | H | -1.0869 | |
| 17 | A | H | -0.8527 | |
| 18 | S | H | -1.0738 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -2.0351 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.9242 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.8027 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.2727 | |
| 27 | G | H | -1.0460 | |
| 28 | Y | H | -0.3273 | |
| 29 | T | H | -0.2535 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.8198 | |
| 36 | T | H | 0.1079 | |
| 37 | F | H | 0.8432 | |
| 38 | W | H | 0.4756 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -1.0614 | |
| 45 | R | H | -1.6394 | |
| 46 | P | H | -1.2272 | |
| 47 | G | H | -1.6260 | |
| 48 | R | H | -2.5603 | |
| 49 | G | H | -1.6167 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.3008 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | R | H | -0.4607 | |
| 56 | I | H | 0.0000 | |
| 57 | A | H | 0.0000 | |
| 58 | P | H | 0.0000 | |
| 59 | N | H | -1.8171 | |
| 62 | S | H | -1.3970 | |
| 63 | G | H | -1.5099 | |
| 64 | D | H | -1.2603 | |
| 65 | T | H | -0.8908 | |
| 66 | K | H | -1.5651 | |
| 67 | Y | H | -1.6658 | |
| 68 | N | H | -2.3753 | |
| 69 | E | H | -3.4405 | |
| 70 | K | H | -3.2299 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.1261 | |
| 74 | S | H | -1.7687 | |
| 75 | K | H | -1.4970 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.8025 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.6931 | |
| 80 | A | H | -1.1174 | |
| 81 | D | H | -1.8166 | |
| 82 | K | H | -2.4677 | |
| 83 | S | H | -1.2820 | |
| 84 | S | H | -1.0754 | |
| 85 | S | H | -1.2416 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.5840 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -1.3374 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.8186 | |
| 93 | S | H | -0.7789 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2746 | |
| 96 | S | H | -1.4496 | |
| 97 | E | H | -2.0136 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.6905 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.0787 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | P | H | 0.2274 | |
| 116 | D | H | -0.2036 | |
| 117 | Y | H | 0.2086 | |
| 118 | W | H | -0.3005 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.3472 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.1825 | |
| 124 | L | H | 0.0000 | |
| 125 | T | H | -0.1632 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6396 | |
| 128 | S | H | -0.7737 | |
| 1 | D | L | -2.1357 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2138 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3401 | |
| 6 | Q | L | -1.0919 | |
| 7 | S | L | -0.7404 | |
| 8 | P | L | -0.3944 | |
| 9 | S | L | -0.4896 | |
| 10 | S | L | -0.3762 | |
| 11 | L | L | -0.0295 | |
| 12 | S | L | -0.2791 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.4787 | |
| 15 | L | L | 0.0636 | |
| 16 | G | L | -1.0191 | |
| 17 | E | L | -1.8646 | |
| 18 | R | L | -2.2702 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.6168 | |
| 21 | L | L | 0.0000 | |
| 22 | T | L | -0.9132 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.8846 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.1267 | |
| 27 | Q | L | -2.6106 | |
| 28 | K | L | -2.7569 | |
| 29 | I | L | 0.0000 | |
| 36 | N | L | -1.8385 | |
| 37 | G | L | -0.6322 | |
| 38 | F | L | 0.7239 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | L | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.4971 | |
| 46 | P | L | -1.3754 | |
| 47 | D | L | -2.2016 | |
| 48 | G | L | -1.4513 | |
| 49 | T | L | -1.1431 | |
| 50 | I | L | 0.0000 | |
| 51 | K | L | -0.9796 | |
| 52 | R | L | -0.7064 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | N | L | 0.6766 | |
| 56 | A | L | 0.6686 | |
| 57 | A | L | 0.0000 | |
| 65 | A | L | 0.7311 | |
| 66 | I | L | 1.9390 | |
| 67 | L | L | 0.5316 | |
| 68 | D | L | -0.3775 | |
| 69 | S | L | -0.5279 | |
| 70 | G | L | -0.8771 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.2270 | |
| 74 | K | L | -2.0275 | |
| 75 | R | L | -1.6197 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3109 | |
| 78 | G | L | -0.1134 | |
| 79 | S | L | -0.8713 | |
| 80 | R | L | -2.3016 | |
| 83 | S | L | -1.5518 | |
| 84 | G | L | -1.6936 | |
| 85 | S | L | -2.1848 | |
| 86 | D | L | -2.0779 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.9892 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6504 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.5663 | |
| 93 | S | L | -1.3860 | |
| 94 | L | L | 0.0000 | |
| 95 | K | L | -1.4283 | |
| 96 | S | L | -1.0052 | |
| 97 | E | L | -1.9376 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.3101 | |
| 100 | A | L | -0.6436 | |
| 101 | D | L | -0.5684 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.6990 | |
| 108 | A | L | 0.0749 | |
| 109 | S | L | -0.0014 | |
| 114 | Y | L | 0.1598 | |
| 115 | P | L | -0.7770 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.5940 | |
| 118 | F | L | -0.3186 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.0497 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | T | L | -0.4343 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.0837 | |
| 126 | I | L | 0.9450 | |
| 127 | K | L | -0.8092 |