| Chain sequence(s) |
L: KGRFTDYYDFVKD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 828 | K | L | -1.7839 | |
| 829 | G | L | -1.1113 | |
| 830 | R | L | -1.7036 | |
| 831 | F | L | 0.8582 | |
| 832 | T | L | -0.1763 | |
| 833 | D | L | -1.5636 | |
| 834 | Y | L | 1.2273 | |
| 835 | Y | L | 1.5090 | |
| 836 | D | L | 0.3222 | |
| 837 | F | L | 2.0499 | |
| 838 | V | L | 1.7811 | |
| 839 | K | L | -1.7019 | |
| 840 | D | L | -2.0968 |