| Chain sequence(s) |
A: DHYNCVSSGGQCLYSACPIFTKIQGTCYRGKAKCCK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:23)
[INFO] Main: Simulation completed successfully. (00:01:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.2947 | |
| 2 | H | A | -1.1568 | |
| 3 | Y | A | 0.2599 | |
| 4 | N | A | -1.2431 | |
| 5 | C | A | 0.0000 | |
| 6 | V | A | 0.1361 | |
| 7 | S | A | -0.3623 | |
| 8 | S | A | -0.5551 | |
| 9 | G | A | -0.7760 | |
| 10 | G | A | -1.0029 | |
| 11 | Q | A | -0.7777 | |
| 12 | C | A | -0.0841 | |
| 13 | L | A | 0.6762 | |
| 14 | Y | A | 0.8999 | |
| 15 | S | A | 0.3104 | |
| 16 | A | A | 0.4173 | |
| 17 | C | A | 0.3716 | |
| 18 | P | A | 1.1393 | |
| 19 | I | A | 2.5383 | |
| 20 | F | A | 2.3903 | |
| 21 | T | A | 0.4664 | |
| 22 | K | A | -0.9642 | |
| 23 | I | A | -0.5644 | |
| 24 | Q | A | -1.5399 | |
| 25 | G | A | -1.7925 | |
| 26 | T | A | -1.9188 | |
| 27 | C | A | 0.0000 | |
| 28 | Y | A | -1.2193 | |
| 29 | R | A | -2.6782 | |
| 30 | G | A | -2.4495 | |
| 31 | K | A | -2.1393 | |
| 32 | A | A | 0.0000 | |
| 33 | K | A | -1.4041 | |
| 34 | C | A | 0.0000 | |
| 35 | C | A | 0.0000 | |
| 36 | K | A | -1.0136 |