Project name: 21d9da134ae4bc0

Status: done

Started: 2025-06-03 05:26:02
Settings
Chain sequence(s) H: EVQLLESGGGLVQPGGSLRLSCAASGFTFSRYAMSWVRQAPGKGLEWVSTISSGGSYTNYADSVKGRFTISRDNVKNTLYLQMNSLRAEDTAVYYCARATARATEFAYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYYTSRLHSGVPSRFSGSGSGTDYTLTISSLQPEDFATYFCQQGNTLPLTFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:54)
Show buried residues

Minimal score value
-2.581
Maximal score value
1.6461
Average score
-0.5536
Total score value
-125.1224

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0660
2 V H -1.0601
3 Q H -1.0599
4 L H 0.0000
5 L H 0.7119
6 E H 0.0000
7 S H -0.2325
8 G H -0.4436
9 G H 0.2457
11 G H 0.7264
12 L H 1.3896
13 V H -0.0121
14 Q H -1.2947
15 P H -1.5221
16 G H -1.3625
17 G H -0.9743
18 S H -1.1090
19 L H -0.7145
20 R H -1.5786
21 L H 0.0000
22 S H -0.3120
23 C H 0.0000
24 A H -0.2196
25 A H 0.0000
26 S H -1.0068
27 G H -1.2183
28 F H -0.6752
29 T H -0.6603
30 F H 0.0000
35 S H -1.2284
36 R H -1.8547
37 Y H -0.6347
38 A H -0.4211
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6028
45 A H -1.0011
46 P H -0.7996
47 G H -1.4591
48 K H -2.2740
49 G H -1.4117
50 L H 0.0000
51 E H -0.9746
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 T H -0.0376
56 I H 0.0000
57 S H -0.2182
58 S H -0.7802
59 G H -0.8329
62 G H -0.2603
63 S H 0.1977
64 Y H 0.8581
65 T H 0.1111
66 N H -0.8313
67 Y H -1.2074
68 A H -1.6269
69 D H -2.5622
70 S H -1.7732
71 V H 0.0000
72 K H -2.5810
74 G H -1.6790
75 R H -1.4982
76 F H 0.0000
77 T H -0.8800
78 I H 0.0000
79 S H -0.2702
80 R H -0.7458
81 D H -0.9193
82 N H -0.9264
83 V H 0.4119
84 K H -1.4289
85 N H -1.1945
86 T H -0.6865
87 L H 0.0000
88 Y H -0.4631
89 L H 0.0000
90 Q H -1.0214
91 M H 0.0000
92 N H -1.2611
93 S H -1.2032
94 L H 0.0000
95 R H -2.1122
96 A H -1.6147
97 E H -2.1927
98 D H 0.0000
99 T H -0.3066
100 A H 0.0000
101 V H 0.9300
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 A H -0.0751
108 T H -0.2666
109 A H -0.9887
110 R H -1.8177
112 A H -0.8096
113 T H -0.3424
114 E H 0.0000
115 F H 0.0000
116 A H 0.0696
117 Y H 0.3143
118 W H -0.2163
119 G H 0.0000
120 Q H -1.2047
121 G H -0.1859
122 T H 0.6064
123 L H 1.6461
124 V H 0.0000
125 T H 0.4022
126 V H 0.0000
127 S H -0.6989
128 S H -0.5549
1 D L -2.0796
2 I L 0.0000
3 Q L -2.0697
4 M L 0.0000
5 T L -1.0521
6 Q L -0.8793
7 S L -0.5416
8 P L -0.5288
9 S L -0.7003
10 S L -0.8833
11 L L -0.5287
12 S L -0.7246
13 A L 0.0000
14 S L -0.1575
15 V L 0.7105
16 G L -0.3969
17 D L -1.3704
18 R L -2.0489
19 V L 0.0000
20 T L -0.5694
21 I L 0.0000
22 T L -0.6669
23 C L 0.0000
24 Q L -2.0106
25 A L 0.0000
26 S L -1.9160
27 Q L -2.3211
28 D L -2.2031
29 I L 0.0000
36 S L -0.8276
37 N L -0.6155
38 Y L 0.0095
39 L L 0.0000
40 N L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.9154
44 Q L 0.0000
45 K L -1.5082
46 P L -1.1049
47 G L -1.5997
48 K L -2.5005
49 A L -1.5307
50 P L 0.0000
51 K L -1.5214
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.1285
56 Y L 0.0759
57 T L 0.0000
65 S L -0.6956
66 R L -1.2612
67 L L -0.3361
68 H L -0.6142
69 S L -0.5537
70 G L -0.5119
71 V L -0.3493
72 P L -0.3354
74 S L -0.3776
75 R L -0.7245
76 F L 0.0000
77 S L -0.5063
78 G L -0.4281
79 S L -0.7827
80 G L -0.9828
83 S L -1.1345
84 G L -1.4550
85 T L -1.8650
86 D L -2.1210
87 Y L 0.0000
88 T L -0.6357
89 L L 0.0000
90 T L -0.5841
91 I L 0.0000
92 S L -1.1542
93 S L -0.9477
94 L L 0.0000
95 Q L -0.4996
96 P L -0.5775
97 E L -1.8579
98 D L 0.0000
99 F L -0.4553
100 A L 0.0000
101 T L -0.8335
102 Y L 0.0000
103 F L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 G L 0.0000
108 N L -0.6020
109 T L -0.2499
114 L L 0.0949
115 P L -0.6898
116 L L 0.0000
117 T L -0.6531
118 F L -0.3229
119 G L 0.0000
120 G L -1.1503
121 G L 0.0000
122 T L 0.0000
123 K L -1.2129
124 V L 0.0000
125 E L -0.9226
126 I L 0.7059
127 K L -0.8523
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Laboratory of Theory of Biopolymers 2018