Project name: 1B7

Status: done

Started: 2025-08-08 05:03:45
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Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCVASGFTLDYYAIGWFRQAPGAEREFVGAINWRGDMTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAEGRGTTGWGTNVEAYDYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:33)
Show buried residues

Minimal score value
-2.5105
Maximal score value
1.1872
Average score
-0.7031
Total score value
-88.5888

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4181
2 V H -0.9811
3 Q H -0.7916
4 L H 0.0000
5 V H 1.1872
6 E H 0.0000
7 S H -0.3667
8 G H -1.0958
9 G H -0.6607
11 G H 0.0543
12 L H 1.1319
13 V H 0.0068
14 Q H -1.3357
15 P H -1.6057
16 G H -1.4150
17 G H -0.9039
18 S H -1.1734
19 L H -0.8355
20 R H -2.0215
21 L H 0.0000
22 S H -0.1312
23 C H 0.0000
24 V H 0.7469
25 A H 0.0000
26 S H -0.3989
27 G H -0.9963
28 F H -0.3324
29 T H -0.1383
30 L H 0.0000
35 D H -0.5184
36 Y H 0.5634
37 Y H -0.0096
38 A H 0.0000
39 I H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.1266
45 A H -1.0788
46 P H -0.7180
47 G H -0.9901
48 A H -1.3606
49 E H -2.3585
50 R H -1.6429
51 E H -1.4094
52 F H 0.0000
53 V H 0.0000
54 G H 0.0000
55 A H 0.0000
56 I H 0.0000
57 N H 0.0000
58 W H -0.9217
59 R H -2.3751
62 G H -2.1316
63 D H -2.2364
64 M H -0.6789
65 T H -0.0011
66 Y H 0.2146
67 Y H -0.5963
68 A H -1.3072
69 D H -2.3996
70 S H -1.7739
71 V H 0.0000
72 K H -2.3794
74 G H -1.6646
75 R H -1.5895
76 F H 0.0000
77 T H -0.7360
78 I H 0.0000
79 S H -0.5807
80 R H -1.4478
81 D H -1.5082
82 N H -2.4540
83 A H -1.5648
84 K H -2.1984
85 N H -1.5587
86 T H 0.0000
87 V H 0.0000
88 Y H -0.3056
89 L H 0.0000
90 Q H -1.1269
91 M H 0.0000
92 N H -1.3551
93 S H -1.2375
94 L H 0.0000
95 K H -2.5105
96 P H -2.0263
97 E H -2.4141
98 D H 0.0000
99 T H -0.8190
100 A H 0.0000
101 V H -0.2244
102 Y H 0.0000
103 Y H -0.0269
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 E H -0.9192
108 G H -1.0950
109 R H -2.1348
110 G H -1.3252
111 T H -0.5875
111A T H -0.4398
111B G H -0.2455
111C W H 0.2621
112C G H -0.5185
112B T H -0.6999
112A N H -1.5590
112 V H -1.2129
113 E H -2.1408
114 A H -1.6758
115 Y H 0.0000
116 D H -1.3493
117 Y H -0.2517
118 W H 0.0648
119 G H -0.0218
120 Q H -0.9936
121 G H -0.4373
122 T H -0.5277
123 Q H -0.7146
124 V H 0.0000
125 T H -0.2181
126 V H 0.0000
127 S H -0.8980
128 S H -0.8899
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Laboratory of Theory of Biopolymers 2018