| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHEGADDRVNFSFDPKQTQLFIVGCEPPTGEHWDIAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPDGHPLPDAPPPSPLYVPPPPGSPYWVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9482 | |
| 2 | L | A | 1.9721 | |
| 3 | P | A | 0.6551 | |
| 4 | P | A | 0.3566 | |
| 5 | T | A | 0.1156 | |
| 6 | T | A | 0.1305 | |
| 7 | P | A | 0.1663 | |
| 8 | V | A | 1.2137 | |
| 9 | A | A | 0.0228 | |
| 10 | K | A | -1.1566 | |
| 11 | V | A | -0.4117 | |
| 12 | Q | A | -1.5336 | |
| 13 | S | A | -1.6044 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3975 | |
| 16 | E | A | -2.4280 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4644 | |
| 20 | P | A | 0.1121 | |
| 21 | T | A | 0.1153 | |
| 22 | S | A | -0.1701 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1073 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2676 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8662 | |
| 31 | R | A | -2.6337 | |
| 32 | L | A | -0.7619 | |
| 33 | L | A | 1.1717 | |
| 34 | T | A | 1.3522 | |
| 35 | V | A | 1.7908 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2366 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6311 | |
| 40 | K | A | -1.6329 | |
| 41 | D | A | -0.9114 | |
| 42 | I | A | 0.8226 | |
| 43 | V | A | 1.0154 | |
| 44 | K | A | -1.1965 | |
| 45 | N | A | -1.9322 | |
| 46 | G | A | -1.2405 | |
| 47 | K | A | -0.9439 | |
| 48 | V | A | 1.5013 | |
| 49 | V | A | 2.0644 | |
| 50 | V | A | 1.2727 | |
| 51 | P | A | 0.4584 | |
| 52 | K | A | -0.6399 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1713 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4943 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3069 | |
| 70 | K | A | -1.8207 | |
| 71 | F | A | -0.6780 | |
| 72 | A | A | -0.5793 | |
| 73 | L | A | -0.8620 | |
| 74 | P | A | -1.2608 | |
| 75 | Q | A | -2.4753 | |
| 76 | K | A | -3.0916 | |
| 77 | D | A | -2.9868 | |
| 78 | F | A | -1.6362 | |
| 79 | Y | A | -1.9147 | |
| 80 | D | A | -2.7552 | |
| 81 | P | A | -2.3476 | |
| 82 | E | A | -3.0654 | |
| 83 | K | A | -3.4319 | |
| 84 | E | A | -2.4937 | |
| 85 | R | A | -1.3052 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6350 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9615 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3032 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6661 | |
| 99 | G | A | -0.5386 | |
| 100 | P | A | -0.4217 | |
| 101 | L | A | 0.0074 | |
| 102 | G | A | -0.2857 | |
| 103 | K | A | -0.7778 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4679 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1037 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1894 | |
| 110 | L | A | -0.1628 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2940 | |
| 113 | K | A | -0.4325 | |
| 114 | L | A | -1.1391 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4941 | |
| 117 | T | A | -1.0491 | |
| 118 | E | A | -2.4355 | |
| 119 | N | A | -2.5228 | |
| 120 | P | A | -2.0397 | |
| 121 | T | A | -1.6672 | |
| 122 | E | A | -2.2377 | |
| 123 | P | A | -1.2832 | |
| 124 | V | A | -1.0315 | |
| 125 | H | A | -1.8232 | |
| 126 | E | A | -2.8150 | |
| 127 | G | A | -2.2945 | |
| 128 | A | A | -1.6275 | |
| 129 | D | A | -2.4843 | |
| 130 | D | A | -2.1475 | |
| 131 | R | A | -1.4299 | |
| 132 | V | A | -0.4660 | |
| 133 | N | A | -0.9158 | |
| 134 | F | A | -0.3949 | |
| 135 | S | A | -0.3641 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7133 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2684 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5572 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2558 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1569 | |
| 157 | D | A | 0.5753 | |
| 158 | I | A | 1.2328 | |
| 159 | A | A | 0.9194 | |
| 160 | P | A | 0.0718 | |
| 161 | P | A | 0.4300 | |
| 162 | C | A | 0.4993 | |
| 163 | P | A | 0.0078 | |
| 164 | G | A | -0.0785 | |
| 165 | L | A | 0.5909 | |
| 166 | P | A | -0.0980 | |
| 167 | P | A | -0.3339 | |
| 168 | G | A | -0.4089 | |
| 169 | A | A | 0.0007 | |
| 170 | C | A | 0.7567 | |
| 171 | P | A | 0.7853 | |
| 172 | P | A | 1.1263 | |
| 173 | I | A | 2.3465 | |
| 174 | Q | A | 1.2410 | |
| 175 | L | A | 1.5108 | |
| 176 | V | A | 0.8457 | |
| 177 | N | A | -0.3171 | |
| 178 | S | A | -0.0029 | |
| 179 | V | A | 0.3973 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3664 | |
| 182 | D | A | 0.0638 | |
| 183 | G | A | -0.1609 | |
| 184 | D | A | -0.5869 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4970 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0883 | |
| 190 | F | A | 0.0211 | |
| 191 | G | A | -0.1549 | |
| 192 | N | A | -0.3494 | |
| 193 | M | A | -0.1675 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4128 | |
| 197 | E | A | -2.5958 | |
| 198 | L | A | -1.2065 | |
| 199 | Q | A | -2.5378 | |
| 200 | Q | A | -3.3586 | |
| 201 | D | A | -3.6152 | |
| 202 | R | A | -3.3638 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1712 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3903 | |
| 211 | S | A | -1.9066 | |
| 212 | T | A | -1.4788 | |
| 213 | R | A | -2.1650 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2203 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3065 | |
| 220 | L | A | 0.5221 | |
| 221 | K | A | -1.2668 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9491 | |
| 224 | N | A | -1.6730 | |
| 225 | E | A | -1.2980 | |
| 226 | A | A | -0.6672 | |
| 227 | Y | A | -0.4453 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7057 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1444 | |
| 234 | F | A | 0.0271 | |
| 235 | G | A | -0.9329 | |
| 236 | R | A | -2.7094 | |
| 237 | R | A | -3.0247 | |
| 238 | E | A | -2.2397 | |
| 239 | Q | A | -0.2360 | |
| 240 | V | A | 1.4961 | |
| 241 | Y | A | 1.2361 | |
| 242 | A | A | 0.1752 | |
| 243 | R | A | -1.2895 | |
| 244 | H | A | -1.1322 | |
| 245 | F | A | -0.1372 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6666 | |
| 249 | S | A | -1.4657 | |
| 250 | G | A | -1.2351 | |
| 251 | P | A | -1.1602 | |
| 252 | D | A | -1.4433 | |
| 253 | G | A | -1.2786 | |
| 254 | H | A | -1.4643 | |
| 255 | P | A | -1.3661 | |
| 256 | L | A | -0.4262 | |
| 257 | P | A | -0.8767 | |
| 258 | D | A | -1.8835 | |
| 259 | A | A | -0.6587 | |
| 260 | P | A | -0.7100 | |
| 261 | P | A | -0.2065 | |
| 262 | P | A | 0.0795 | |
| 263 | S | A | 0.2830 | |
| 264 | P | A | 0.6843 | |
| 265 | L | A | 1.8659 | |
| 266 | Y | A | 1.5497 | |
| 267 | V | A | 1.9424 | |
| 268 | P | A | 0.9241 | |
| 269 | P | A | 0.8708 | |
| 270 | P | A | -0.0015 | |
| 271 | P | A | -0.3060 | |
| 272 | G | A | -0.1098 | |
| 273 | S | A | 0.5133 | |
| 274 | P | A | 0.8275 | |
| 275 | Y | A | 1.8661 | |
| 276 | W | A | 1.9365 | |
| 277 | V | A | 2.0962 | |
| 278 | R | A | 0.7480 | |
| 279 | P | A | -0.2592 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.5405 | |
| 282 | D | A | -0.7723 | |
| 283 | Y | A | 0.9321 | |
| 284 | F | A | 0.7424 | |
| 285 | G | A | 0.1530 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8979 | |
| 291 | L | A | 1.5859 | |
| 292 | V | A | 0.5857 | |
| 293 | S | A | -0.1697 | |
| 294 | S | A | -0.9729 | |
| 295 | D | A | -1.8466 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1516 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6299 | |
| 301 | R | A | -1.8979 | |
| 302 | P | A | -0.9694 | |
| 303 | F | A | -0.1853 | |
| 304 | W | A | -0.5202 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0794 | |
| 307 | R | A | -2.9220 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7862 | |
| 310 | G | A | -1.4263 | |
| 311 | N | A | -1.3948 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9553 | |
| 319 | N | A | -0.9130 | |
| 320 | E | A | -1.0684 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3758 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1266 | |
| 333 | N | A | 0.5281 | |
| 334 | F | A | 1.7463 | |
| 335 | T | A | 0.8721 | |
| 336 | I | A | 0.4367 | |
| 337 | S | A | -0.8819 | |
| 338 | Q | A | -1.5487 | |
| 339 | Q | A | -0.6943 | |
| 340 | L | A | 0.9379 | |
| 341 | C | A | 0.7561 | |
| 342 | T | A | 0.5504 | |
| 343 | P | A | 0.3346 | |
| 344 | L | A | 1.3593 | |
| 345 | P | A | 0.6612 | |
| 346 | N | A | 0.0343 | |
| 347 | V | A | 1.7363 | |
| 348 | Y | A | 1.6245 | |
| 349 | D | A | 0.2285 | |
| 350 | P | A | -0.3511 | |
| 351 | S | A | -0.2945 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5481 | |
| 354 | K | A | -1.7562 | |
| 355 | N | A | -1.7420 | |
| 356 | Y | A | -0.0796 | |
| 357 | L | A | 0.6554 | |
| 358 | R | A | 0.9568 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3484 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0163 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9010 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6562 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3062 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3184 | |
| 376 | L | A | -1.7419 | |
| 377 | D | A | -2.0128 | |
| 378 | P | A | -1.0548 | |
| 379 | G | A | -1.0166 | |
| 380 | V | A | -0.9290 | |
| 381 | L | A | -0.5385 | |
| 382 | A | A | -0.6577 | |
| 383 | H | A | -0.8450 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3924 | |
| 386 | T | A | -0.5700 | |
| 387 | M | A | -0.3280 | |
| 388 | N | A | -0.8682 | |
| 389 | P | A | -1.2779 | |
| 390 | T | A | -1.6173 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5745 | |
| 393 | E | A | -3.0151 | |
| 394 | N | A | -2.8090 | |
| 395 | W | A | -1.6025 | |
| 396 | N | A | -1.2897 | |
| 397 | L | A | -0.2715 | |
| 398 | G | A | 0.5079 | |
| 399 | F | A | 2.4017 | |
| 400 | V | A | 1.8203 | |
| 401 | P | A | 0.0420 | |
| 402 | P | A | -2.0145 | |
| 403 | K | A | -3.5727 | |
| 404 | E | A | -4.1434 | |
| 405 | R | A | -4.7299 | |
| 406 | E | A | -4.1548 | |
| 407 | D | A | -3.0357 | |
| 408 | P | A | -1.8594 | |
| 409 | Y | A | -0.9823 | |
| 410 | K | A | -2.1008 | |
| 411 | G | A | -0.6338 | |
| 412 | L | A | 0.6654 | |
| 413 | I | A | 1.5767 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4038 | |
| 416 | E | A | -1.6891 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9482 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0743 | |
| 421 | E | A | -2.7866 | |
| 422 | R | A | -2.6383 | |
| 423 | F | A | -1.2994 | |
| 424 | S | A | -1.4727 | |
| 425 | Q | A | -1.9305 | |
| 426 | D | A | -2.8926 | |
| 427 | L | A | -1.9679 | |
| 428 | D | A | -2.7371 | |
| 429 | Q | A | -2.5903 | |
| 430 | F | A | -1.3971 | |
| 431 | A | A | -0.8626 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.4887 | |
| 435 | K | A | -0.6669 | |
| 436 | F | A | 0.1948 | |
| 437 | L | A | 1.0662 | |
| 438 | Y | A | 0.8560 | |
| 439 | Q | A | -0.2528 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine