| Chain sequence(s) |
A: EAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAKGGGGSGGGGSGGGGSEAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:10)
[INFO] Main: Simulation completed successfully. (00:02:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.4348 | |
| 2 | A | A | -1.8163 | |
| 3 | A | A | -1.6055 | |
| 4 | A | A | -2.0276 | |
| 5 | K | A | -3.3479 | |
| 6 | E | A | -3.4712 | |
| 7 | A | A | -2.3322 | |
| 8 | A | A | -2.1869 | |
| 9 | A | A | -2.5053 | |
| 10 | K | A | -3.6016 | |
| 11 | E | A | -3.6617 | |
| 12 | A | A | -2.5131 | |
| 13 | A | A | -2.1823 | |
| 14 | A | A | -2.5246 | |
| 15 | K | A | -3.6065 | |
| 16 | E | A | -3.6637 | |
| 17 | A | A | -2.5410 | |
| 18 | A | A | -2.1794 | |
| 19 | A | A | -2.4991 | |
| 20 | K | A | -3.6065 | |
| 21 | E | A | -3.6529 | |
| 22 | A | A | -2.5149 | |
| 23 | A | A | -2.1830 | |
| 24 | A | A | -2.4923 | |
| 25 | K | A | -3.6045 | |
| 26 | E | A | -3.6590 | |
| 27 | A | A | -2.5321 | |
| 28 | A | A | -2.1948 | |
| 29 | A | A | -2.5062 | |
| 30 | K | A | -3.4619 | |
| 31 | E | A | -3.5121 | |
| 32 | A | A | -2.2296 | |
| 33 | A | A | -1.9276 | |
| 34 | A | A | -2.2652 | |
| 35 | K | A | -2.9259 | |
| 36 | G | A | -2.1355 | |
| 37 | G | A | -1.7424 | |
| 38 | G | A | -1.6759 | |
| 39 | G | A | -1.5402 | |
| 40 | S | A | -1.0458 | |
| 41 | G | A | -1.1775 | |
| 42 | G | A | -1.2028 | |
| 43 | G | A | -1.1664 | |
| 44 | G | A | -1.1762 | |
| 45 | S | A | -1.0068 | |
| 46 | G | A | -1.1872 | |
| 47 | G | A | -1.5742 | |
| 48 | G | A | -1.6080 | |
| 49 | G | A | -1.4901 | |
| 50 | S | A | -1.9887 | |
| 51 | E | A | -2.9022 | |
| 52 | A | A | -2.1785 | |
| 53 | A | A | -1.8582 | |
| 54 | A | A | -2.1828 | |
| 55 | K | A | -3.3892 | |
| 56 | E | A | -3.5038 | |
| 57 | A | A | -2.5271 | |
| 58 | A | A | -2.1705 | |
| 59 | A | A | -2.4945 | |
| 60 | K | A | -3.5965 | |
| 61 | E | A | -3.6456 | |
| 62 | A | A | -2.5029 | |
| 63 | A | A | -2.1717 | |
| 64 | A | A | -2.4899 | |
| 65 | K | A | -3.5813 | |
| 66 | E | A | -3.6353 | |
| 67 | A | A | -2.5071 | |
| 68 | A | A | -2.1800 | |
| 69 | A | A | -2.4954 | |
| 70 | K | A | -3.5805 | |
| 71 | E | A | -3.6446 | |
| 72 | A | A | -2.5000 | |
| 73 | A | A | -2.1559 | |
| 74 | A | A | -2.4864 | |
| 75 | K | A | -3.5822 | |
| 76 | E | A | -3.6167 | |
| 77 | A | A | -2.4872 | |
| 78 | A | A | -2.1877 | |
| 79 | A | A | -2.3144 | |
| 80 | K | A | -3.3767 | |
| 81 | E | A | -3.3393 | |
| 82 | A | A | -1.9973 | |
| 83 | A | A | -1.5566 | |
| 84 | A | A | -1.7552 | |
| 85 | K | A | -2.2834 |