| Chain sequence(s) |
A: IVIVKGHE
C: IVIVKGHE B: IVIVKGHE E: IVIVKGHE D: IVIVKGHE G: IVIVKGHE F: IVIVKGHE H: IVIVKGHE input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:16)
[INFO] Main: Simulation completed successfully. (00:02:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 4.0554 | |
| 2 | V | A | 3.7138 | |
| 3 | I | A | 2.3706 | |
| 4 | V | A | 0.3210 | |
| 5 | K | A | -2.4621 | |
| 6 | G | A | -3.4730 | |
| 7 | H | A | -3.6957 | |
| 8 | E | A | -3.7607 | |
| 1 | I | B | 3.9893 | |
| 2 | V | B | 3.8825 | |
| 3 | I | B | 3.4403 | |
| 4 | V | B | 0.7064 | |
| 5 | K | B | -1.9815 | |
| 6 | G | B | -3.1091 | |
| 7 | H | B | -3.3860 | |
| 8 | E | B | -3.5622 | |
| 1 | I | C | 4.2239 | |
| 2 | V | C | 4.0698 | |
| 3 | I | C | 3.2857 | |
| 4 | V | C | 0.8547 | |
| 5 | K | C | -1.9574 | |
| 6 | G | C | -3.0818 | |
| 7 | H | C | -3.3322 | |
| 8 | E | C | -3.5146 | |
| 1 | I | D | 4.1378 | |
| 2 | V | D | 4.3920 | |
| 3 | I | D | 3.5903 | |
| 4 | V | D | 0.9521 | |
| 5 | K | D | -1.9355 | |
| 6 | G | D | -3.2374 | |
| 7 | H | D | -3.8066 | |
| 8 | E | D | -3.7011 | |
| 1 | I | E | 4.3094 | |
| 2 | V | E | 4.1458 | |
| 3 | I | E | 3.3024 | |
| 4 | V | E | 0.7728 | |
| 5 | K | E | -1.9836 | |
| 6 | G | E | -3.3212 | |
| 7 | H | E | -3.6065 | |
| 8 | E | E | -3.7280 | |
| 1 | I | F | 4.1342 | |
| 2 | V | F | 4.1297 | |
| 3 | I | F | 3.5387 | |
| 4 | V | F | 0.8967 | |
| 5 | K | F | -1.8146 | |
| 6 | G | F | -3.0527 | |
| 7 | H | F | -3.1330 | |
| 8 | E | F | -3.4887 | |
| 1 | I | G | 4.3539 | |
| 2 | V | G | 4.2020 | |
| 3 | I | G | 3.4075 | |
| 4 | V | G | 0.9656 | |
| 5 | K | G | -1.7234 | |
| 6 | G | G | -3.0341 | |
| 7 | H | G | -3.2735 | |
| 8 | E | G | -3.4999 | |
| 1 | I | H | 3.9909 | |
| 2 | V | H | 3.8010 | |
| 3 | I | H | 3.4044 | |
| 4 | V | H | 0.6538 | |
| 5 | K | H | -2.0409 | |
| 6 | G | H | -3.1953 | |
| 7 | H | H | -3.8061 | |
| 8 | E | H | -3.7857 |