| Chain sequence(s) |
D: VHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVYPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH
input PDB |
| Selected Chain(s) | D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with D chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:01)
[INFO] Main: Simulation completed successfully. (00:03:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | V | D | 0.5808 | |
| 3 | H | D | -0.6943 | |
| 4 | L | D | 0.0000 | |
| 5 | T | D | -1.3334 | |
| 6 | P | D | -1.6863 | |
| 7 | E | D | -2.4292 | |
| 8 | E | D | -1.9589 | |
| 9 | K | D | -1.8375 | |
| 10 | S | D | -1.4174 | |
| 11 | A | D | -1.0139 | |
| 12 | V | D | 0.0000 | |
| 13 | T | D | -0.6302 | |
| 14 | A | D | -0.6217 | |
| 15 | L | D | 0.0000 | |
| 16 | W | D | -0.5713 | |
| 17 | G | D | -1.1849 | |
| 18 | K | D | -1.8744 | |
| 19 | V | D | 0.0000 | |
| 20 | N | D | -1.8308 | |
| 21 | V | D | -0.6517 | |
| 22 | D | D | -2.4813 | |
| 23 | E | D | -2.8079 | |
| 24 | V | D | 0.0000 | |
| 25 | G | D | 0.0000 | |
| 26 | G | D | 0.0000 | |
| 27 | E | D | -1.8003 | |
| 28 | A | D | 0.0000 | |
| 29 | L | D | 0.0000 | |
| 30 | G | D | 0.0000 | |
| 31 | R | D | -0.3713 | |
| 32 | L | D | 0.0000 | |
| 33 | L | D | 0.0000 | |
| 34 | V | D | 0.4208 | |
| 35 | V | D | 1.0245 | |
| 36 | Y | D | 0.7657 | |
| 37 | P | D | 0.0671 | |
| 38 | W | D | 0.1712 | |
| 39 | T | D | 0.0000 | |
| 40 | Q | D | -1.0932 | |
| 41 | R | D | -1.9364 | |
| 42 | F | D | -0.5434 | |
| 43 | F | D | -1.3049 | |
| 44 | E | D | -2.4884 | |
| 45 | S | D | -1.5286 | |
| 46 | F | D | -1.3843 | |
| 47 | G | D | -1.9794 | |
| 48 | D | D | -2.6974 | |
| 49 | L | D | 0.0000 | |
| 50 | S | D | -1.1052 | |
| 51 | T | D | -1.0590 | |
| 52 | P | D | -1.0359 | |
| 53 | D | D | -2.1256 | |
| 54 | A | D | -1.6020 | |
| 55 | V | D | 0.0000 | |
| 56 | M | D | -1.1560 | |
| 57 | G | D | -1.5284 | |
| 58 | N | D | 0.0000 | |
| 59 | P | D | -1.3254 | |
| 60 | K | D | -1.8424 | |
| 61 | V | D | 0.0000 | |
| 62 | K | D | -2.3245 | |
| 63 | A | D | -1.9449 | |
| 64 | H | D | -1.6012 | |
| 65 | G | D | 0.0000 | |
| 66 | K | D | -2.4127 | |
| 67 | K | D | -2.1195 | |
| 68 | V | D | -0.7807 | |
| 69 | L | D | 0.0000 | |
| 70 | G | D | -1.1627 | |
| 71 | A | D | -0.9230 | |
| 72 | F | D | 0.0000 | |
| 73 | S | D | -0.7624 | |
| 74 | D | D | -1.6199 | |
| 75 | G | D | 0.0000 | |
| 76 | L | D | -0.8680 | |
| 77 | A | D | -1.0104 | |
| 78 | H | D | -2.0383 | |
| 79 | L | D | -1.6185 | |
| 80 | D | D | -2.5548 | |
| 81 | N | D | -2.7409 | |
| 82 | L | D | 0.0000 | |
| 83 | K | D | -2.4925 | |
| 84 | G | D | -1.8135 | |
| 85 | T | D | -1.4532 | |
| 86 | F | D | 0.0000 | |
| 87 | A | D | -1.1477 | |
| 88 | T | D | -0.6872 | |
| 89 | L | D | -0.6792 | |
| 90 | S | D | 0.0000 | |
| 91 | E | D | -3.0959 | |
| 92 | L | D | -1.5468 | |
| 93 | H | D | -1.2483 | |
| 94 | C | D | 0.0000 | |
| 95 | D | D | -3.4833 | |
| 96 | K | D | -2.7255 | |
| 97 | L | D | -0.9089 | |
| 98 | H | D | -1.2827 | |
| 99 | V | D | -0.2006 | |
| 100 | Y | D | 0.6299 | |
| 101 | P | D | -0.6723 | |
| 102 | E | D | -1.4828 | |
| 103 | N | D | 0.0000 | |
| 104 | F | D | 0.0000 | |
| 105 | R | D | -2.3157 | |
| 106 | L | D | -1.0564 | |
| 107 | L | D | -0.7182 | |
| 108 | G | D | 0.0000 | |
| 109 | N | D | -1.0771 | |
| 110 | V | D | 0.0000 | |
| 111 | L | D | 0.0000 | |
| 112 | V | D | 0.0000 | |
| 113 | C | D | -0.3123 | |
| 114 | V | D | 0.0000 | |
| 115 | L | D | 0.0000 | |
| 116 | A | D | -1.2868 | |
| 117 | H | D | -1.6036 | |
| 118 | H | D | -1.8905 | |
| 119 | F | D | -1.8077 | |
| 120 | G | D | -2.1840 | |
| 121 | K | D | -2.7933 | |
| 122 | E | D | -2.4695 | |
| 123 | F | D | 0.0000 | |
| 124 | T | D | -1.2435 | |
| 125 | P | D | -0.8886 | |
| 126 | P | D | -0.7458 | |
| 127 | V | D | -0.9483 | |
| 128 | Q | D | -0.9839 | |
| 129 | A | D | -0.6812 | |
| 130 | A | D | 0.0000 | |
| 131 | Y | D | 0.0000 | |
| 132 | Q | D | -1.1498 | |
| 133 | K | D | -0.6928 | |
| 134 | V | D | 0.0000 | |
| 135 | V | D | 0.0000 | |
| 136 | A | D | -0.7681 | |
| 137 | G | D | -0.5035 | |
| 138 | V | D | 0.0000 | |
| 139 | A | D | -1.3700 | |
| 140 | N | D | -1.6557 | |
| 141 | A | D | 0.0000 | |
| 142 | L | D | -1.2809 | |
| 143 | A | D | 0.0000 | |
| 144 | H | D | -2.5641 | |
| 145 | K | D | -3.0670 | |
| 146 | Y | D | -1.6957 | |
| 147 | H | D | -1.7003 |