| Chain sequence(s) |
A: GREEEILERARELRERAEEAIRFLDENADEPWAAGPLGQMLRDIAEAIIRIAEAVELLLEPPTEERVERALELIAEAWALALAAILELLLVKKVEVKRKQNGDDSPPTQEEIEAAREEAEKMREEFEKLLEEVKKEGPLTEVEHVLKLLEKFLKYLDKIIELAEELASIDPDNELAKNILEAAKKLKELFEKLIEELKKSPEWLLVLAETVLEAAETLYDLIVKPALEAYKA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -2.5813 | |
| 2 | R | A | -3.1091 | |
| 3 | E | A | -4.0250 | |
| 4 | E | A | -4.2678 | |
| 5 | E | A | -4.3774 | |
| 6 | I | A | 0.0000 | |
| 7 | L | A | -3.2806 | |
| 8 | E | A | -4.3100 | |
| 9 | R | A | -3.7588 | |
| 10 | A | A | 0.0000 | |
| 11 | R | A | -4.2632 | |
| 12 | E | A | -4.3148 | |
| 13 | L | A | 0.0000 | |
| 14 | R | A | -3.8624 | |
| 15 | E | A | -4.1541 | |
| 16 | R | A | -3.5636 | |
| 17 | A | A | 0.0000 | |
| 18 | E | A | -3.0809 | |
| 19 | E | A | -3.5842 | |
| 20 | A | A | 0.0000 | |
| 21 | I | A | -2.5275 | |
| 22 | R | A | -3.5065 | |
| 23 | F | A | -2.4891 | |
| 24 | L | A | 0.0000 | |
| 25 | D | A | -3.4842 | |
| 26 | E | A | -3.4051 | |
| 27 | N | A | -2.7009 | |
| 28 | A | A | -2.4478 | |
| 29 | D | A | -2.7461 | |
| 30 | E | A | -2.0764 | |
| 31 | P | A | -1.0040 | |
| 32 | W | A | -0.4456 | |
| 33 | A | A | -1.1518 | |
| 34 | A | A | -0.9350 | |
| 35 | G | A | -0.3295 | |
| 36 | P | A | -0.5837 | |
| 37 | L | A | -0.1642 | |
| 38 | G | A | 0.0000 | |
| 39 | Q | A | -0.8187 | |
| 40 | M | A | 0.0000 | |
| 41 | L | A | 0.0000 | |
| 42 | R | A | -1.1443 | |
| 43 | D | A | -0.6796 | |
| 44 | I | A | 0.0000 | |
| 45 | A | A | 0.0000 | |
| 46 | E | A | -0.9785 | |
| 47 | A | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | I | A | -1.6142 | |
| 50 | R | A | -1.4458 | |
| 51 | I | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | E | A | -1.5113 | |
| 54 | A | A | 0.0000 | |
| 55 | V | A | 0.0000 | |
| 56 | E | A | -1.3003 | |
| 57 | L | A | -0.6303 | |
| 58 | L | A | 0.0000 | |
| 59 | L | A | -0.8937 | |
| 60 | E | A | -1.4613 | |
| 61 | P | A | -0.9711 | |
| 62 | P | A | -1.4254 | |
| 63 | T | A | -2.1176 | |
| 64 | E | A | -3.1297 | |
| 65 | E | A | -3.3285 | |
| 66 | R | A | -2.8229 | |
| 67 | V | A | 0.0000 | |
| 68 | E | A | 0.0000 | |
| 69 | R | A | -1.7138 | |
| 70 | A | A | 0.0000 | |
| 71 | L | A | 0.0000 | |
| 72 | E | A | -0.9291 | |
| 73 | L | A | -0.2154 | |
| 74 | I | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | E | A | -1.0662 | |
| 77 | A | A | 0.0000 | |
| 78 | W | A | 0.0000 | |
| 79 | A | A | 0.0000 | |
| 80 | L | A | 0.0000 | |
| 81 | A | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | A | A | 0.0000 | |
| 84 | A | A | 0.0000 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | E | A | 0.0000 | |
| 88 | L | A | 0.0000 | |
| 89 | L | A | 0.0000 | |
| 90 | L | A | -0.2189 | |
| 91 | V | A | 0.0000 | |
| 92 | K | A | -0.4178 | |
| 93 | K | A | -0.6433 | |
| 94 | V | A | -0.6361 | |
| 95 | E | A | -1.6173 | |
| 96 | V | A | -1.5917 | |
| 97 | K | A | -2.2901 | |
| 98 | R | A | -2.8783 | |
| 99 | K | A | -3.3060 | |
| 100 | Q | A | -3.1084 | |
| 101 | N | A | -3.1708 | |
| 102 | G | A | -3.1104 | |
| 103 | D | A | -3.6962 | |
| 104 | D | A | -3.4741 | |
| 105 | S | A | -1.9406 | |
| 106 | P | A | -1.3788 | |
| 107 | P | A | 0.0000 | |
| 108 | T | A | -1.5185 | |
| 109 | Q | A | -2.4487 | |
| 110 | E | A | -2.9868 | |
| 111 | E | A | -2.0281 | |
| 112 | I | A | -1.9770 | |
| 113 | E | A | -2.8343 | |
| 114 | A | A | -2.3628 | |
| 115 | A | A | 0.0000 | |
| 116 | R | A | -3.0793 | |
| 117 | E | A | -3.6595 | |
| 118 | E | A | -2.9914 | |
| 119 | A | A | 0.0000 | |
| 120 | E | A | -3.3558 | |
| 121 | K | A | -3.7854 | |
| 122 | M | A | 0.0000 | |
| 123 | R | A | -2.8197 | |
| 124 | E | A | -3.2250 | |
| 125 | E | A | -2.8259 | |
| 126 | F | A | 0.0000 | |
| 127 | E | A | -3.0428 | |
| 128 | K | A | -3.6462 | |
| 129 | L | A | -2.5856 | |
| 130 | L | A | 0.0000 | |
| 131 | E | A | -4.3769 | |
| 132 | E | A | -4.4801 | |
| 133 | V | A | 0.0000 | |
| 134 | K | A | -4.0537 | |
| 135 | K | A | -4.1970 | |
| 136 | E | A | -3.7443 | |
| 137 | G | A | -2.5938 | |
| 138 | P | A | -2.0563 | |
| 139 | L | A | 0.0000 | |
| 140 | T | A | -1.4016 | |
| 141 | E | A | -1.3629 | |
| 142 | V | A | -1.3003 | |
| 143 | E | A | -2.2294 | |
| 144 | H | A | 0.0000 | |
| 145 | V | A | 0.0000 | |
| 146 | L | A | -1.6745 | |
| 147 | K | A | -1.3883 | |
| 148 | L | A | 0.0000 | |
| 149 | L | A | 0.0000 | |
| 150 | E | A | -2.2014 | |
| 151 | K | A | -1.7623 | |
| 152 | F | A | 0.0000 | |
| 153 | L | A | -2.1114 | |
| 154 | K | A | -2.4606 | |
| 155 | Y | A | 0.0000 | |
| 156 | L | A | 0.0000 | |
| 157 | D | A | -2.1229 | |
| 158 | K | A | -1.9843 | |
| 159 | I | A | 0.0000 | |
| 160 | I | A | -2.1152 | |
| 161 | E | A | -2.5794 | |
| 162 | L | A | -1.5800 | |
| 163 | A | A | 0.0000 | |
| 164 | E | A | -2.4308 | |
| 165 | E | A | -1.7354 | |
| 166 | L | A | 0.0000 | |
| 167 | A | A | -1.6554 | |
| 168 | S | A | -0.9903 | |
| 169 | I | A | -0.8608 | |
| 170 | D | A | -1.8454 | |
| 171 | P | A | -1.9076 | |
| 172 | D | A | -2.6788 | |
| 173 | N | A | -2.2540 | |
| 174 | E | A | -2.7244 | |
| 175 | L | A | -1.4374 | |
| 176 | A | A | 0.0000 | |
| 177 | K | A | -2.4654 | |
| 178 | N | A | -1.7988 | |
| 179 | I | A | 0.0000 | |
| 180 | L | A | -1.9938 | |
| 181 | E | A | -2.3362 | |
| 182 | A | A | 0.0000 | |
| 183 | A | A | 0.0000 | |
| 184 | K | A | -2.5722 | |
| 185 | K | A | -2.4753 | |
| 186 | L | A | 0.0000 | |
| 187 | K | A | -2.8556 | |
| 188 | E | A | -3.3465 | |
| 189 | L | A | 0.0000 | |
| 190 | F | A | 0.0000 | |
| 191 | E | A | -3.3593 | |
| 192 | K | A | -3.4873 | |
| 193 | L | A | 0.0000 | |
| 194 | I | A | -2.6084 | |
| 195 | E | A | -3.4829 | |
| 196 | E | A | -2.8899 | |
| 197 | L | A | 0.0000 | |
| 198 | K | A | -3.2543 | |
| 199 | K | A | -3.2207 | |
| 200 | S | A | -2.2181 | |
| 201 | P | A | -1.7070 | |
| 202 | E | A | -1.8225 | |
| 203 | W | A | -1.1638 | |
| 204 | L | A | -0.1315 | |
| 205 | L | A | -0.6699 | |
| 206 | V | A | -0.2751 | |
| 207 | L | A | 0.0000 | |
| 208 | A | A | 0.0000 | |
| 209 | E | A | -1.0115 | |
| 210 | T | A | -0.6379 | |
| 211 | V | A | 0.0000 | |
| 212 | L | A | 0.0000 | |
| 213 | E | A | -1.1000 | |
| 214 | A | A | 0.0000 | |
| 215 | A | A | 0.0000 | |
| 216 | E | A | -1.2475 | |
| 217 | T | A | -1.0032 | |
| 218 | L | A | 0.0000 | |
| 219 | Y | A | 0.0000 | |
| 220 | D | A | -1.5408 | |
| 221 | L | A | -0.8335 | |
| 222 | I | A | 0.0000 | |
| 223 | V | A | 0.0000 | |
| 224 | K | A | -1.5294 | |
| 225 | P | A | -1.3044 | |
| 226 | A | A | -0.9936 | |
| 227 | L | A | 0.0000 | |
| 228 | E | A | -1.8119 | |
| 229 | A | A | -1.0906 | |
| 230 | Y | A | -0.8024 | |
| 231 | K | A | -1.8703 | |
| 232 | A | A | -0.9017 |