| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDHYVITYGETGVGWVPGQTFTVPGSKSTATISGLKPGVDYTITVYAYSEWSYFVINPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.5439 | |
| 2 | S | A | -0.0728 | |
| 3 | D | A | -0.9028 | |
| 4 | V | A | -1.1877 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.5450 | |
| 7 | D | A | -3.5595 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.2046 | |
| 10 | V | A | 0.0535 | |
| 11 | V | A | 1.5095 | |
| 12 | A | A | 0.8703 | |
| 13 | A | A | 0.2919 | |
| 14 | T | A | -0.5327 | |
| 15 | P | A | -1.1195 | |
| 16 | T | A | -0.9934 | |
| 17 | S | A | -0.5427 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.6920 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1962 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.3841 | |
| 24 | A | A | -1.8000 | |
| 25 | P | A | 0.0000 | |
| 26 | A | A | -0.0696 | |
| 27 | V | A | 0.1615 | |
| 28 | T | A | -0.5035 | |
| 29 | V | A | -1.1097 | |
| 30 | D | A | -2.0523 | |
| 31 | H | A | -1.5961 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.4265 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.1757 | |
| 36 | Y | A | -0.0667 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -0.7052 | |
| 39 | T | A | -0.5624 | |
| 40 | G | A | 0.1342 | |
| 41 | V | A | 1.4385 | |
| 42 | G | A | 0.8287 | |
| 43 | W | A | 1.3388 | |
| 44 | V | A | 0.9238 | |
| 45 | P | A | -0.0687 | |
| 46 | G | A | -0.4078 | |
| 47 | Q | A | -0.5359 | |
| 48 | T | A | -0.0869 | |
| 49 | F | A | 0.3537 | |
| 50 | T | A | 0.1821 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.2924 | |
| 53 | G | A | -1.5194 | |
| 54 | S | A | -1.4982 | |
| 55 | K | A | -2.1692 | |
| 56 | S | A | -1.5164 | |
| 57 | T | A | -0.7894 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2765 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.7179 | |
| 62 | G | A | -1.0880 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3755 | |
| 65 | P | A | -1.6539 | |
| 66 | G | A | -1.4467 | |
| 67 | V | A | -1.4395 | |
| 68 | D | A | -1.9706 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.6242 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.3028 | |
| 75 | A | A | 0.0000 | |
| 76 | Y | A | 0.3550 | |
| 77 | S | A | 0.0000 | |
| 78 | E | A | -1.1846 | |
| 79 | W | A | 0.7227 | |
| 80 | S | A | 0.0000 | |
| 81 | Y | A | 2.3782 | |
| 82 | F | A | 2.7543 | |
| 83 | V | A | 1.7317 | |
| 84 | I | A | 0.0000 | |
| 85 | N | A | -0.8227 | |
| 86 | P | A | -0.5327 | |
| 87 | I | A | -0.5298 | |
| 88 | S | A | -0.4530 | |
| 89 | I | A | -0.7244 | |
| 90 | N | A | -1.7520 | |
| 91 | Y | A | -1.4962 | |
| 92 | R | A | -2.5702 | |
| 93 | T | A | -1.5216 |