Project name: query_structure

Status: done

Started: 2026-03-16 21:40:32
Settings
Chain sequence(s) A: MLPAPKNLVVSRITEDSARLSWTAPDAAFDSFPIRYIETLIWGEAIWLDVPGSERSYDLTGLKPGTEYTVVIDGVKGGGRSQPLVATFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-2.9498
Maximal score value
2.8141
Average score
-0.5859
Total score value
-52.7274

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.6414
2 L A -0.0923
3 P A -0.5012
4 A A -1.0107
5 P A 0.0000
6 K A -2.2349
7 N A -1.3886
8 L A 0.1251
9 V A 1.1294
10 V A 0.3274
11 S A -0.5644
12 R A -1.9177
13 I A -0.7892
14 T A -1.6504
15 E A -2.9498
16 D A -2.6340
17 S A -2.0011
18 A A 0.0000
19 R A -1.2144
20 L A 0.0000
21 S A -0.4355
22 W A 0.0000
23 T A -1.3502
24 A A -1.4450
25 P A -1.4025
26 D A -2.2918
27 A A -1.4272
28 A A -1.1816
29 F A 0.0000
30 D A -2.5826
31 S A -1.9204
32 F A 0.0000
33 P A 0.0000
34 I A 0.0000
35 R A 0.1911
36 Y A 0.3863
37 I A 0.0000
38 E A 0.3361
39 T A 1.1578
40 L A 2.5004
41 I A 2.8141
42 W A 2.0122
43 G A 0.6361
44 E A -0.9924
45 A A -0.0252
46 I A 1.0530
47 W A 1.0422
48 L A 0.0927
49 D A -1.4631
50 V A 0.0000
51 P A -1.5666
52 G A 0.0000
53 S A -1.6911
54 E A -1.8796
55 R A -1.2238
56 S A -0.7432
57 Y A -0.9857
58 D A -1.7203
59 L A 0.0000
60 T A -1.4441
61 G A -1.4885
62 L A 0.0000
63 K A -2.9343
64 P A -2.4568
65 G A -1.7265
66 T A 0.0000
67 E A -0.7586
68 Y A 0.0000
69 T A 0.1850
70 V A 0.0000
71 V A 0.0000
72 I A 0.0000
73 D A 0.0000
74 G A 0.0000
75 V A -1.8191
76 K A -2.1371
77 G A -1.6547
78 G A -1.5409
79 G A -1.4284
80 R A -1.9332
81 S A 0.0000
82 Q A -1.0418
83 P A -0.5126
84 L A 0.3135
85 V A 1.7478
86 A A 1.1237
87 T A 0.3092
88 F A 0.0000
89 T A -0.9885
90 T A -1.7103
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Laboratory of Theory of Biopolymers 2018