| Chain sequence(s) |
A: MLPAPKNLVVSRITEDSARLSWTAPDAAFDSFPIRYIETLIWGEAIWLDVPGSERSYDLTGLKPGTEYTVVIDGVKGGGRSQPLVATFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6414 | |
| 2 | L | A | -0.0923 | |
| 3 | P | A | -0.5012 | |
| 4 | A | A | -1.0107 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.2349 | |
| 7 | N | A | -1.3886 | |
| 8 | L | A | 0.1251 | |
| 9 | V | A | 1.1294 | |
| 10 | V | A | 0.3274 | |
| 11 | S | A | -0.5644 | |
| 12 | R | A | -1.9177 | |
| 13 | I | A | -0.7892 | |
| 14 | T | A | -1.6504 | |
| 15 | E | A | -2.9498 | |
| 16 | D | A | -2.6340 | |
| 17 | S | A | -2.0011 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2144 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4355 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.3502 | |
| 24 | A | A | -1.4450 | |
| 25 | P | A | -1.4025 | |
| 26 | D | A | -2.2918 | |
| 27 | A | A | -1.4272 | |
| 28 | A | A | -1.1816 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.5826 | |
| 31 | S | A | -1.9204 | |
| 32 | F | A | 0.0000 | |
| 33 | P | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | R | A | 0.1911 | |
| 36 | Y | A | 0.3863 | |
| 37 | I | A | 0.0000 | |
| 38 | E | A | 0.3361 | |
| 39 | T | A | 1.1578 | |
| 40 | L | A | 2.5004 | |
| 41 | I | A | 2.8141 | |
| 42 | W | A | 2.0122 | |
| 43 | G | A | 0.6361 | |
| 44 | E | A | -0.9924 | |
| 45 | A | A | -0.0252 | |
| 46 | I | A | 1.0530 | |
| 47 | W | A | 1.0422 | |
| 48 | L | A | 0.0927 | |
| 49 | D | A | -1.4631 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.5666 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.6911 | |
| 54 | E | A | -1.8796 | |
| 55 | R | A | -1.2238 | |
| 56 | S | A | -0.7432 | |
| 57 | Y | A | -0.9857 | |
| 58 | D | A | -1.7203 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.4441 | |
| 61 | G | A | -1.4885 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9343 | |
| 64 | P | A | -2.4568 | |
| 65 | G | A | -1.7265 | |
| 66 | T | A | 0.0000 | |
| 67 | E | A | -0.7586 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | 0.1850 | |
| 70 | V | A | 0.0000 | |
| 71 | V | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | D | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.8191 | |
| 76 | K | A | -2.1371 | |
| 77 | G | A | -1.6547 | |
| 78 | G | A | -1.5409 | |
| 79 | G | A | -1.4284 | |
| 80 | R | A | -1.9332 | |
| 81 | S | A | 0.0000 | |
| 82 | Q | A | -1.0418 | |
| 83 | P | A | -0.5126 | |
| 84 | L | A | 0.3135 | |
| 85 | V | A | 1.7478 | |
| 86 | A | A | 1.1237 | |
| 87 | T | A | 0.3092 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -0.9885 | |
| 90 | T | A | -1.7103 |