| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASQYIGSRIAWFRQAPGKGRELVAYGASNSAGDSRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAARTSSASGYADDESIYDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:50)
[INFO] Main: Simulation completed successfully. (00:00:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.3531 | |
| 2 | V | C | -1.5319 | |
| 3 | Q | C | -1.5624 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 0.6212 | |
| 6 | E | C | 0.0000 | |
| 7 | S | C | -0.6830 | |
| 8 | G | C | -1.0065 | |
| 9 | G | C | -0.7864 | |
| 10 | G | C | -0.0680 | |
| 11 | L | C | 0.9957 | |
| 12 | V | C | -0.0418 | |
| 13 | Q | C | -1.3374 | |
| 14 | P | C | -1.6450 | |
| 15 | G | C | -1.4681 | |
| 16 | G | C | -0.9772 | |
| 17 | S | C | -1.3555 | |
| 18 | L | C | -1.1276 | |
| 19 | R | C | -2.2971 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.4860 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.4772 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -1.1817 | |
| 26 | Q | C | -1.4923 | |
| 27 | Y | C | 0.1253 | |
| 28 | I | C | -0.0503 | |
| 29 | G | C | -0.4269 | |
| 30 | S | C | -0.5479 | |
| 31 | R | C | -0.8029 | |
| 32 | I | C | 0.0000 | |
| 33 | A | C | 0.0000 | |
| 34 | W | C | 0.0000 | |
| 35 | F | C | 0.0000 | |
| 36 | R | C | -1.2288 | |
| 37 | Q | C | -1.7709 | |
| 38 | A | C | -1.7072 | |
| 39 | P | C | -1.1737 | |
| 40 | G | C | -1.6565 | |
| 41 | K | C | -2.7239 | |
| 42 | G | C | -2.2788 | |
| 43 | R | C | -2.4589 | |
| 44 | E | C | -2.6197 | |
| 45 | L | C | -1.3826 | |
| 46 | V | C | 0.0000 | |
| 47 | A | C | 0.0000 | |
| 48 | Y | C | -0.1968 | |
| 49 | G | C | -0.4625 | |
| 50 | A | C | -0.5810 | |
| 51 | S | C | -0.6765 | |
| 52 | N | C | -1.0616 | |
| 53 | S | C | -0.7351 | |
| 54 | A | C | -0.8801 | |
| 55 | G | C | -0.8867 | |
| 56 | D | C | -1.0257 | |
| 57 | S | C | -0.9110 | |
| 58 | R | C | -0.9223 | |
| 59 | F | C | 0.0000 | |
| 60 | T | C | -0.9970 | |
| 61 | I | C | 0.0000 | |
| 62 | S | C | -0.6948 | |
| 63 | R | C | -1.2451 | |
| 64 | D | C | -1.7601 | |
| 65 | N | C | -1.9863 | |
| 66 | A | C | -1.5039 | |
| 67 | K | C | -2.5680 | |
| 68 | R | C | -2.2044 | |
| 69 | M | C | -1.1737 | |
| 70 | V | C | 0.0000 | |
| 71 | Y | C | -0.7114 | |
| 72 | L | C | 0.0000 | |
| 73 | Q | C | -1.6532 | |
| 74 | M | C | 0.0000 | |
| 75 | N | C | -1.4941 | |
| 76 | S | C | -1.2704 | |
| 77 | L | C | 0.0000 | |
| 78 | R | C | -2.4787 | |
| 79 | A | C | -1.8331 | |
| 80 | E | C | -2.2864 | |
| 81 | D | C | 0.0000 | |
| 82 | T | C | -0.9174 | |
| 83 | A | C | 0.0000 | |
| 84 | V | C | -0.4442 | |
| 85 | Y | C | 0.0000 | |
| 86 | Y | C | -0.2918 | |
| 87 | C | C | 0.0000 | |
| 88 | A | C | 0.0000 | |
| 89 | A | C | 0.0000 | |
| 90 | R | C | 0.0000 | |
| 91 | T | C | -0.5548 | |
| 92 | S | C | -0.5145 | |
| 93 | S | C | -0.3235 | |
| 94 | A | C | -0.2091 | |
| 95 | S | C | -0.0810 | |
| 96 | G | C | -0.2145 | |
| 97 | Y | C | 0.2579 | |
| 98 | A | C | -0.5999 | |
| 99 | D | C | -2.1078 | |
| 100 | D | C | -1.6947 | |
| 101 | E | C | -1.8531 | |
| 102 | S | C | -0.9919 | |
| 103 | I | C | -0.6491 | |
| 104 | Y | C | 0.0000 | |
| 105 | D | C | -1.3974 | |
| 106 | Y | C | -0.7959 | |
| 107 | W | C | -0.1847 | |
| 108 | G | C | -0.2383 | |
| 109 | Q | C | -0.9084 | |
| 110 | G | C | 0.0000 | |
| 111 | T | C | -0.7413 | |
| 112 | Q | C | -0.9938 | |
| 113 | V | C | 0.0000 | |
| 114 | T | C | -0.3147 | |
| 115 | V | C | 0.0000 | |
| 116 | S | C | -0.7908 | |
| 117 | S | C | -0.5390 |