| Chain sequence(s) |
A: FKFEKGH
C: FKFEKGH B: FKFEKGH E: FKFEKGH D: FKFEKGH G: FKFEKGH F: FKFEKGH I: FKFEKGH H: FKFEKGH K: FKFEKGH J: FKFEKGH L: FKFEKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:25)
[INFO] Main: Simulation completed successfully. (00:07:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | -0.7726 | |
| 2 | K | A | -1.7763 | |
| 3 | F | A | 0.0000 | |
| 4 | E | A | -1.5767 | |
| 5 | K | A | -0.9565 | |
| 6 | G | A | -1.1714 | |
| 7 | H | A | -1.1847 | |
| 1 | F | B | -0.6046 | |
| 2 | K | B | -1.5391 | |
| 3 | F | B | 0.0000 | |
| 4 | E | B | -1.8936 | |
| 5 | K | B | 0.0000 | |
| 6 | G | B | -1.4921 | |
| 7 | H | B | -1.6869 | |
| 1 | F | C | -1.1418 | |
| 2 | K | C | -1.9370 | |
| 3 | F | C | 0.0000 | |
| 4 | E | C | -1.5451 | |
| 5 | K | C | 0.0000 | |
| 6 | G | C | -1.0949 | |
| 7 | H | C | -1.2842 | |
| 1 | F | D | 1.1607 | |
| 2 | K | D | -0.4073 | |
| 3 | F | D | -0.5511 | |
| 4 | E | D | -2.3033 | |
| 5 | K | D | -2.5202 | |
| 6 | G | D | -2.0295 | |
| 7 | H | D | -1.5288 | |
| 1 | F | E | 0.9740 | |
| 2 | K | E | -0.8513 | |
| 3 | F | E | -0.6936 | |
| 4 | E | E | -2.0626 | |
| 5 | K | E | -2.1004 | |
| 6 | G | E | -1.8251 | |
| 7 | H | E | -1.5372 | |
| 1 | F | F | -1.2312 | |
| 2 | K | F | -1.8778 | |
| 3 | F | F | 0.0000 | |
| 4 | E | F | -1.0957 | |
| 5 | K | F | -0.4377 | |
| 6 | G | F | -0.8762 | |
| 7 | H | F | -1.1351 | |
| 1 | F | G | -0.7459 | |
| 2 | K | G | -1.7383 | |
| 3 | F | G | 0.0000 | |
| 4 | E | G | -1.1988 | |
| 5 | K | G | -0.6350 | |
| 6 | G | G | -0.9519 | |
| 7 | H | G | -1.2492 | |
| 1 | F | H | 0.4638 | |
| 2 | K | H | -1.1495 | |
| 3 | F | H | 0.0000 | |
| 4 | E | H | -2.3111 | |
| 5 | K | H | 0.0000 | |
| 6 | G | H | -1.6626 | |
| 7 | H | H | -1.6698 | |
| 1 | F | I | -0.8478 | |
| 2 | K | I | -1.9959 | |
| 3 | F | I | 0.0000 | |
| 4 | E | I | -2.0082 | |
| 5 | K | I | -1.1701 | |
| 6 | G | I | -1.4112 | |
| 7 | H | I | -1.3217 | |
| 1 | F | J | 0.6842 | |
| 2 | K | J | -1.5957 | |
| 3 | F | J | -1.3913 | |
| 4 | E | J | -2.9778 | |
| 5 | K | J | -2.2794 | |
| 6 | G | J | -1.9121 | |
| 7 | H | J | -1.4200 | |
| 1 | F | K | 0.0805 | |
| 2 | K | K | -1.8801 | |
| 3 | F | K | -1.5939 | |
| 4 | E | K | -2.7504 | |
| 5 | K | K | -1.9224 | |
| 6 | G | K | -1.6354 | |
| 7 | H | K | -1.2998 | |
| 1 | F | L | -1.2805 | |
| 2 | K | L | -2.1327 | |
| 3 | F | L | 0.0000 | |
| 4 | E | L | -1.7401 | |
| 5 | K | L | -0.9592 | |
| 6 | G | L | -1.0890 | |
| 7 | H | L | -1.1338 |