| Chain sequence(s) |
A: GSVSSVPTKLEVVAATPTSLLISWDAKPMSYEPVYYYRITYGETGGNSPVQEFTVPGYYSTATISGLKPGVDYTITVYADSMSSYYYSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1459 | |
| 2 | S | A | 0.3764 | |
| 3 | V | A | 1.4894 | |
| 4 | S | A | 0.9692 | |
| 5 | S | A | 0.7813 | |
| 6 | V | A | 0.5440 | |
| 7 | P | A | 0.0000 | |
| 8 | T | A | -1.6663 | |
| 9 | K | A | -2.6091 | |
| 10 | L | A | 0.0000 | |
| 11 | E | A | -1.8842 | |
| 12 | V | A | 0.0953 | |
| 13 | V | A | 1.5360 | |
| 14 | A | A | 0.9011 | |
| 15 | A | A | 0.3317 | |
| 16 | T | A | -0.3300 | |
| 17 | P | A | -1.1019 | |
| 18 | T | A | -0.9861 | |
| 19 | S | A | -0.5155 | |
| 20 | L | A | 0.0000 | |
| 21 | L | A | 0.7633 | |
| 22 | I | A | 0.0000 | |
| 23 | S | A | -0.6279 | |
| 24 | W | A | 0.0000 | |
| 25 | D | A | -2.4903 | |
| 26 | A | A | -0.7989 | |
| 27 | K | A | -0.6090 | |
| 28 | P | A | -0.4057 | |
| 29 | M | A | 0.3373 | |
| 30 | S | A | 0.0488 | |
| 31 | Y | A | 0.5486 | |
| 32 | E | A | -0.0525 | |
| 33 | P | A | 0.5345 | |
| 34 | V | A | 0.0000 | |
| 35 | Y | A | 2.0856 | |
| 36 | Y | A | 1.8783 | |
| 37 | Y | A | 0.0000 | |
| 38 | R | A | -0.0621 | |
| 39 | I | A | 0.0000 | |
| 40 | T | A | 0.0000 | |
| 41 | Y | A | -0.1972 | |
| 42 | G | A | 0.0000 | |
| 43 | E | A | -1.6285 | |
| 44 | T | A | -1.2868 | |
| 45 | G | A | -1.2597 | |
| 46 | G | A | -1.4528 | |
| 47 | N | A | -1.5802 | |
| 48 | S | A | -0.9100 | |
| 49 | P | A | -0.2954 | |
| 50 | V | A | 0.5304 | |
| 51 | Q | A | -0.6634 | |
| 52 | E | A | -1.2420 | |
| 53 | F | A | -0.3396 | |
| 54 | T | A | 0.2716 | |
| 55 | V | A | 1.0020 | |
| 56 | P | A | 1.2656 | |
| 57 | G | A | 0.0000 | |
| 58 | Y | A | 2.2031 | |
| 59 | Y | A | 1.9296 | |
| 60 | S | A | 0.4311 | |
| 61 | T | A | 0.3574 | |
| 62 | A | A | 0.0000 | |
| 63 | T | A | 0.2654 | |
| 64 | I | A | 0.0000 | |
| 65 | S | A | -0.6565 | |
| 66 | G | A | -1.0255 | |
| 67 | L | A | 0.0000 | |
| 68 | K | A | -2.3772 | |
| 69 | P | A | -1.6551 | |
| 70 | G | A | -1.4569 | |
| 71 | V | A | -1.4451 | |
| 72 | D | A | -2.1180 | |
| 73 | Y | A | 0.0000 | |
| 74 | T | A | -0.7863 | |
| 75 | I | A | 0.0000 | |
| 76 | T | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | Y | A | 0.6425 | |
| 79 | A | A | 0.0000 | |
| 80 | D | A | 0.0000 | |
| 81 | S | A | 1.2944 | |
| 82 | M | A | 1.3953 | |
| 83 | S | A | 0.9344 | |
| 84 | S | A | 1.1899 | |
| 85 | Y | A | 2.1891 | |
| 86 | Y | A | 2.5225 | |
| 87 | Y | A | 2.0397 | |
| 88 | S | A | 1.2349 | |
| 89 | P | A | 0.5317 | |
| 90 | I | A | 0.0068 | |
| 91 | S | A | -0.5593 | |
| 92 | I | A | -0.7399 | |
| 93 | N | A | -1.7361 | |
| 94 | Y | A | -1.4643 | |
| 95 | R | A | -2.5279 | |
| 96 | T | A | -1.4971 |