Project name: query_structure

Status: done

Started: 2026-03-16 23:38:57
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Chain sequence(s) A: GSVSSVPTKLEVVAATPTSLLISWDAKPMSYEPVYYYRITYGETGGNSPVQEFTVPGYYSTATISGLKPGVDYTITVYADSMSSYYYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:52)
Show buried residues

Minimal score value
-2.6091
Maximal score value
2.5225
Average score
-0.1013
Total score value
-9.728

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.1459
2 S A 0.3764
3 V A 1.4894
4 S A 0.9692
5 S A 0.7813
6 V A 0.5440
7 P A 0.0000
8 T A -1.6663
9 K A -2.6091
10 L A 0.0000
11 E A -1.8842
12 V A 0.0953
13 V A 1.5360
14 A A 0.9011
15 A A 0.3317
16 T A -0.3300
17 P A -1.1019
18 T A -0.9861
19 S A -0.5155
20 L A 0.0000
21 L A 0.7633
22 I A 0.0000
23 S A -0.6279
24 W A 0.0000
25 D A -2.4903
26 A A -0.7989
27 K A -0.6090
28 P A -0.4057
29 M A 0.3373
30 S A 0.0488
31 Y A 0.5486
32 E A -0.0525
33 P A 0.5345
34 V A 0.0000
35 Y A 2.0856
36 Y A 1.8783
37 Y A 0.0000
38 R A -0.0621
39 I A 0.0000
40 T A 0.0000
41 Y A -0.1972
42 G A 0.0000
43 E A -1.6285
44 T A -1.2868
45 G A -1.2597
46 G A -1.4528
47 N A -1.5802
48 S A -0.9100
49 P A -0.2954
50 V A 0.5304
51 Q A -0.6634
52 E A -1.2420
53 F A -0.3396
54 T A 0.2716
55 V A 1.0020
56 P A 1.2656
57 G A 0.0000
58 Y A 2.2031
59 Y A 1.9296
60 S A 0.4311
61 T A 0.3574
62 A A 0.0000
63 T A 0.2654
64 I A 0.0000
65 S A -0.6565
66 G A -1.0255
67 L A 0.0000
68 K A -2.3772
69 P A -1.6551
70 G A -1.4569
71 V A -1.4451
72 D A -2.1180
73 Y A 0.0000
74 T A -0.7863
75 I A 0.0000
76 T A 0.0000
77 V A 0.0000
78 Y A 0.6425
79 A A 0.0000
80 D A 0.0000
81 S A 1.2944
82 M A 1.3953
83 S A 0.9344
84 S A 1.1899
85 Y A 2.1891
86 Y A 2.5225
87 Y A 2.0397
88 S A 1.2349
89 P A 0.5317
90 I A 0.0068
91 S A -0.5593
92 I A -0.7399
93 N A -1.7361
94 Y A -1.4643
95 R A -2.5279
96 T A -1.4971
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Laboratory of Theory of Biopolymers 2018