| Chain sequence(s) |
A: LQVDIVPSQGEISVGESKFFLCQVAGMLPTCEISWFSPNGEKLTPNQQRISVVWNDDSSSTLTIYNANIDDAGIYKCVVHGPQCPRLTWSLGLPEATVNVKIFQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:43)
[INFO] Main: Simulation completed successfully. (00:00:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | -0.2628 | |
| 2 | Q | A | -1.4632 | |
| 3 | V | A | -1.3823 | |
| 4 | D | A | -1.4457 | |
| 5 | I | A | 0.0000 | |
| 6 | V | A | 0.6209 | |
| 7 | P | A | -0.1103 | |
| 8 | S | A | -0.8159 | |
| 9 | Q | A | -1.9696 | |
| 10 | G | A | 0.0000 | |
| 11 | E | A | -2.8058 | |
| 12 | I | A | 0.0000 | |
| 13 | S | A | -1.1419 | |
| 14 | V | A | -0.4418 | |
| 15 | G | A | -1.3270 | |
| 16 | E | A | -2.1868 | |
| 17 | S | A | -0.9606 | |
| 18 | K | A | -0.2715 | |
| 19 | F | A | 1.9629 | |
| 20 | F | A | 0.0000 | |
| 21 | L | A | 0.7084 | |
| 22 | C | A | 0.0000 | |
| 23 | Q | A | -1.5496 | |
| 24 | V | A | 0.0000 | |
| 25 | A | A | -0.6228 | |
| 26 | G | A | -0.4006 | |
| 27 | M | A | -0.5907 | |
| 28 | L | A | -0.3547 | |
| 29 | P | A | -0.8134 | |
| 30 | T | A | -0.9925 | |
| 31 | C | A | 0.0000 | |
| 32 | E | A | -1.8377 | |
| 33 | I | A | 0.0000 | |
| 34 | S | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | F | A | -1.3416 | |
| 37 | S | A | -1.3611 | |
| 38 | P | A | -1.3077 | |
| 39 | N | A | -2.0949 | |
| 40 | G | A | -2.2280 | |
| 41 | E | A | -3.2188 | |
| 42 | K | A | -2.7585 | |
| 43 | L | A | -1.6535 | |
| 44 | T | A | -1.2031 | |
| 45 | P | A | -0.9425 | |
| 46 | N | A | -2.3777 | |
| 47 | Q | A | -2.5504 | |
| 48 | Q | A | -2.4339 | |
| 49 | R | A | -1.8759 | |
| 50 | I | A | 0.0000 | |
| 51 | S | A | -0.3651 | |
| 52 | V | A | 0.0000 | |
| 53 | V | A | 0.8598 | |
| 54 | W | A | -0.5801 | |
| 55 | N | A | -1.9472 | |
| 56 | D | A | -3.0151 | |
| 57 | D | A | -3.1207 | |
| 58 | S | A | -2.0284 | |
| 59 | S | A | 0.0000 | |
| 60 | S | A | 0.0000 | |
| 61 | T | A | 0.6533 | |
| 62 | L | A | 0.0000 | |
| 63 | T | A | 0.8833 | |
| 64 | I | A | 0.0000 | |
| 65 | Y | A | -0.6732 | |
| 66 | N | A | -1.9899 | |
| 67 | A | A | 0.0000 | |
| 68 | N | A | -1.2862 | |
| 69 | I | A | -0.1911 | |
| 70 | D | A | -1.4937 | |
| 71 | D | A | 0.0000 | |
| 72 | A | A | -0.9205 | |
| 73 | G | A | -0.4784 | |
| 74 | I | A | 0.2222 | |
| 75 | Y | A | 0.0000 | |
| 76 | K | A | -1.0744 | |
| 77 | C | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | H | A | -1.3092 | |
| 81 | G | A | -1.2484 | |
| 82 | P | A | -1.2907 | |
| 83 | Q | A | -1.7736 | |
| 84 | C | A | 0.0000 | |
| 85 | P | A | -1.0512 | |
| 86 | R | A | -1.3608 | |
| 87 | L | A | 0.3534 | |
| 88 | T | A | 0.6292 | |
| 89 | W | A | 1.2068 | |
| 90 | S | A | 0.9055 | |
| 91 | L | A | 1.3252 | |
| 92 | G | A | 0.1539 | |
| 93 | L | A | -0.2049 | |
| 94 | P | A | 0.0000 | |
| 95 | E | A | -1.5785 | |
| 96 | A | A | -1.1069 | |
| 97 | T | A | -0.6651 | |
| 98 | V | A | 0.0000 | |
| 99 | N | A | -1.5658 | |
| 100 | V | A | 0.0000 | |
| 101 | K | A | -2.0955 | |
| 102 | I | A | 0.0000 | |
| 103 | F | A | -0.4226 | |
| 104 | Q | A | -0.5079 |