Project name: 18F8A2

Status: done

Started: 2026-07-22 07:58:30
Settings
Chain sequence(s) H: QVTLKESGPGILQPSQTLSLTCSFSGFSLRTSGLGVGWVRQPSGKGLEWLAHIWWDDDKDYNPVLKNRLTISKDTSTRQVFLKIAGVDSTDSARYYCIRVTHNSLFGAMDYWGQGTSVTVSS
L: DIVMTQSHKFMSTSGGDRVSITCKASHDVRNDVAWYQQKPGQSPKLLIYSTSYRYTGVSDRFTGSGSGTDFTFTISSVEAEDLAVYYCQQHSSSPWTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:13)
Show buried residues

Minimal score value
-3.2793
Maximal score value
1.4648
Average score
-0.6731
Total score value
-154.1329

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.2921
2 V H -0.5765
3 T H -0.8169
4 L H 0.0000
5 K H -1.9085
6 E H 0.0000
7 S H -0.8345
8 G H -0.2363
9 P H 0.1754
11 G H 0.3879
12 I H 1.4648
13 L H 0.1023
14 Q H -1.1098
15 P H -1.2187
16 S H -1.1978
17 Q H -1.3268
18 T H -0.9803
19 L H 0.0000
20 S H -0.7048
21 L H 0.0000
22 T H -0.4128
23 C H 0.0000
24 S H -0.8552
25 F H 0.0000
26 S H -0.8625
27 G H -0.8324
28 F H -0.5819
29 S H -0.8412
30 L H 0.0000
31 R H -2.3456
34 T H -1.1388
35 S H -1.1597
36 G H -1.0885
37 L H -0.7604
38 G H 0.0000
39 V H 0.0000
40 G H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -1.2287
45 P H 0.0000
46 S H -1.2118
47 G H -1.4330
48 K H -2.2339
49 G H -1.3398
50 L H 0.0000
51 E H -0.7799
52 W H 0.0000
53 L H 0.0000
54 A H 0.0000
55 H H 0.0000
56 I H 0.0000
57 W H -1.7145
58 W H -1.9028
59 D H -2.9779
63 D H -2.9294
64 D H -3.0102
65 K H -1.9730
66 D H -1.3310
67 Y H -0.6806
68 N H -0.5887
69 P H -0.4180
70 V H 0.7930
71 L H 0.0000
72 K H -1.9948
74 N H -1.9811
75 R H -1.5411
76 L H 0.0000
77 T H -1.0908
78 I H 0.0000
79 S H -0.7541
80 K H -0.6475
81 D H -1.1803
82 T H -1.2423
83 S H -0.9069
84 T H -0.6837
85 R H -1.1644
86 Q H -0.8779
87 V H 0.0000
88 F H 0.0976
89 L H 0.0000
90 K H -1.2818
91 I H 0.0000
92 A H -1.1325
93 G H -1.1633
94 V H 0.0000
95 D H -1.5013
96 S H -0.9360
97 T H -0.5223
98 D H 0.0000
99 S H -0.3735
100 A H 0.0000
101 R H -1.2201
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 I H 0.0000
106 R H -0.0669
107 V H 0.0000
108 T H -0.4917
109 H H -1.0520
110 N H -1.0969
111 S H -0.3232
112A L H 0.6846
112 F H 0.2225
113 G H -0.4163
114 A H 0.0000
115 M H 0.0000
116 D H 0.0000
117 Y H 0.1217
118 W H -0.5142
119 G H 0.0000
120 Q H -1.9101
121 G H -1.3575
122 T H -1.0708
123 S H -0.6359
124 V H 0.0000
125 T H 0.0704
126 V H 0.0000
127 S H -0.4090
128 S H -0.5529
1 D L -1.3786
2 I L 0.0000
3 V L 0.8187
4 M L 0.0000
5 T L -0.8084
6 Q L -1.0130
7 S L -1.2559
8 H L -1.4985
9 K L -1.5536
10 F L 0.4630
11 M L 0.1630
12 S L -0.2927
13 T L 0.0000
14 S L -1.5124
15 G L -1.8941
16 G L -1.6694
17 D L -2.0108
18 R L -2.4299
19 V L 0.0000
20 S L -0.7023
21 I L 0.0000
22 T L -0.9738
23 C L 0.0000
24 K L -2.1390
25 A L 0.0000
26 S L -1.0954
27 H L -2.2050
28 D L -3.2793
29 V L 0.0000
36 R L -2.9657
37 N L -2.2063
38 D L -1.3016
39 V L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.7749
45 K L -1.0873
46 P L -0.6782
47 G L -1.1137
48 Q L -1.4546
49 S L -1.2429
50 P L 0.0000
51 K L -1.2622
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.0000
56 S L -0.2682
57 T L 0.0000
65 S L -0.1280
66 Y L 0.6311
67 R L -0.5644
68 Y L -0.1503
69 T L -0.1929
70 G L -0.6827
71 V L -0.6945
72 S L -1.1632
74 D L -2.1227
75 R L -1.5501
76 F L 0.0000
77 T L -0.5901
78 G L 0.0000
79 S L -0.5898
80 G L -1.3919
83 S L -1.9421
84 G L -2.5679
85 T L -2.5467
86 D L -2.5574
87 F L 0.0000
88 T L -0.7235
89 F L 0.0000
90 T L -0.5944
91 I L 0.0000
92 S L -1.6614
93 S L -1.7938
94 V L 0.0000
95 E L -1.6698
96 A L -1.3210
97 E L -1.8669
98 D L 0.0000
99 L L -0.1617
100 A L 0.0000
101 V L 0.0165
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 H L -0.5350
108 S L -1.1102
109 S L -0.8306
114 S L -0.6976
115 P L -0.5775
116 W L 0.0000
117 T L -0.2012
118 F L 0.0000
119 G L 0.0000
120 G L -1.1628
121 G L 0.0000
122 T L 0.0000
123 K L -0.5448
124 L L 0.0000
125 E L -0.0855
126 I L -0.7403
127 K L -1.6367
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Laboratory of Theory of Biopolymers 2018