| Chain sequence(s) |
H: QVTLKESGPGILQPSQTLSLTCSFSGFSLRTSGLGVGWVRQPSGKGLEWLAHIWWDDDKDYNPVLKNRLTISKDTSTRQVFLKIAGVDSTDSARYYCIRVTHNSLFGAMDYWGQGTSVTVSS
L: DIVMTQSHKFMSTSGGDRVSITCKASHDVRNDVAWYQQKPGQSPKLLIYSTSYRYTGVSDRFTGSGSGTDFTFTISSVEAEDLAVYYCQQHSSSPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.2921 | |
| 2 | V | H | -0.5765 | |
| 3 | T | H | -0.8169 | |
| 4 | L | H | 0.0000 | |
| 5 | K | H | -1.9085 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.8345 | |
| 8 | G | H | -0.2363 | |
| 9 | P | H | 0.1754 | |
| 11 | G | H | 0.3879 | |
| 12 | I | H | 1.4648 | |
| 13 | L | H | 0.1023 | |
| 14 | Q | H | -1.1098 | |
| 15 | P | H | -1.2187 | |
| 16 | S | H | -1.1978 | |
| 17 | Q | H | -1.3268 | |
| 18 | T | H | -0.9803 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.7048 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.4128 | |
| 23 | C | H | 0.0000 | |
| 24 | S | H | -0.8552 | |
| 25 | F | H | 0.0000 | |
| 26 | S | H | -0.8625 | |
| 27 | G | H | -0.8324 | |
| 28 | F | H | -0.5819 | |
| 29 | S | H | -0.8412 | |
| 30 | L | H | 0.0000 | |
| 31 | R | H | -2.3456 | |
| 34 | T | H | -1.1388 | |
| 35 | S | H | -1.1597 | |
| 36 | G | H | -1.0885 | |
| 37 | L | H | -0.7604 | |
| 38 | G | H | 0.0000 | |
| 39 | V | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.2287 | |
| 45 | P | H | 0.0000 | |
| 46 | S | H | -1.2118 | |
| 47 | G | H | -1.4330 | |
| 48 | K | H | -2.2339 | |
| 49 | G | H | -1.3398 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7799 | |
| 52 | W | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | H | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | W | H | -1.7145 | |
| 58 | W | H | -1.9028 | |
| 59 | D | H | -2.9779 | |
| 63 | D | H | -2.9294 | |
| 64 | D | H | -3.0102 | |
| 65 | K | H | -1.9730 | |
| 66 | D | H | -1.3310 | |
| 67 | Y | H | -0.6806 | |
| 68 | N | H | -0.5887 | |
| 69 | P | H | -0.4180 | |
| 70 | V | H | 0.7930 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -1.9948 | |
| 74 | N | H | -1.9811 | |
| 75 | R | H | -1.5411 | |
| 76 | L | H | 0.0000 | |
| 77 | T | H | -1.0908 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.7541 | |
| 80 | K | H | -0.6475 | |
| 81 | D | H | -1.1803 | |
| 82 | T | H | -1.2423 | |
| 83 | S | H | -0.9069 | |
| 84 | T | H | -0.6837 | |
| 85 | R | H | -1.1644 | |
| 86 | Q | H | -0.8779 | |
| 87 | V | H | 0.0000 | |
| 88 | F | H | 0.0976 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.2818 | |
| 91 | I | H | 0.0000 | |
| 92 | A | H | -1.1325 | |
| 93 | G | H | -1.1633 | |
| 94 | V | H | 0.0000 | |
| 95 | D | H | -1.5013 | |
| 96 | S | H | -0.9360 | |
| 97 | T | H | -0.5223 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.3735 | |
| 100 | A | H | 0.0000 | |
| 101 | R | H | -1.2201 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | I | H | 0.0000 | |
| 106 | R | H | -0.0669 | |
| 107 | V | H | 0.0000 | |
| 108 | T | H | -0.4917 | |
| 109 | H | H | -1.0520 | |
| 110 | N | H | -1.0969 | |
| 111 | S | H | -0.3232 | |
| 112A | L | H | 0.6846 | |
| 112 | F | H | 0.2225 | |
| 113 | G | H | -0.4163 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.1217 | |
| 118 | W | H | -0.5142 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.9101 | |
| 121 | G | H | -1.3575 | |
| 122 | T | H | -1.0708 | |
| 123 | S | H | -0.6359 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.0704 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4090 | |
| 128 | S | H | -0.5529 | |
| 1 | D | L | -1.3786 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.8187 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.8084 | |
| 6 | Q | L | -1.0130 | |
| 7 | S | L | -1.2559 | |
| 8 | H | L | -1.4985 | |
| 9 | K | L | -1.5536 | |
| 10 | F | L | 0.4630 | |
| 11 | M | L | 0.1630 | |
| 12 | S | L | -0.2927 | |
| 13 | T | L | 0.0000 | |
| 14 | S | L | -1.5124 | |
| 15 | G | L | -1.8941 | |
| 16 | G | L | -1.6694 | |
| 17 | D | L | -2.0108 | |
| 18 | R | L | -2.4299 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.7023 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.9738 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -2.1390 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.0954 | |
| 27 | H | L | -2.2050 | |
| 28 | D | L | -3.2793 | |
| 29 | V | L | 0.0000 | |
| 36 | R | L | -2.9657 | |
| 37 | N | L | -2.2063 | |
| 38 | D | L | -1.3016 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.7749 | |
| 45 | K | L | -1.0873 | |
| 46 | P | L | -0.6782 | |
| 47 | G | L | -1.1137 | |
| 48 | Q | L | -1.4546 | |
| 49 | S | L | -1.2429 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.2622 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0000 | |
| 56 | S | L | -0.2682 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | -0.1280 | |
| 66 | Y | L | 0.6311 | |
| 67 | R | L | -0.5644 | |
| 68 | Y | L | -0.1503 | |
| 69 | T | L | -0.1929 | |
| 70 | G | L | -0.6827 | |
| 71 | V | L | -0.6945 | |
| 72 | S | L | -1.1632 | |
| 74 | D | L | -2.1227 | |
| 75 | R | L | -1.5501 | |
| 76 | F | L | 0.0000 | |
| 77 | T | L | -0.5901 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.5898 | |
| 80 | G | L | -1.3919 | |
| 83 | S | L | -1.9421 | |
| 84 | G | L | -2.5679 | |
| 85 | T | L | -2.5467 | |
| 86 | D | L | -2.5574 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7235 | |
| 89 | F | L | 0.0000 | |
| 90 | T | L | -0.5944 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.6614 | |
| 93 | S | L | -1.7938 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.6698 | |
| 96 | A | L | -1.3210 | |
| 97 | E | L | -1.8669 | |
| 98 | D | L | 0.0000 | |
| 99 | L | L | -0.1617 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | 0.0165 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | H | L | -0.5350 | |
| 108 | S | L | -1.1102 | |
| 109 | S | L | -0.8306 | |
| 114 | S | L | -0.6976 | |
| 115 | P | L | -0.5775 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.2012 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.1628 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.5448 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.0855 | |
| 126 | I | L | -0.7403 | |
| 127 | K | L | -1.6367 |