Project name: 25.C5C6

Status: done

Started: 2026-07-07 08:44:01
Settings
Chain sequence(s) H: QVQLQQPGAEFVRPGASVILSCKASGYTFTNYWIHWVKQRPGRGLEWIGRIIPNSGDTKYNERFKSKATLTAAKSSSTAYMQLSSLTSEDSAVYFCTRPDYWGQGTTLTVSS
L: DIQMTQSPSSLSASLGERVSLTCRASQEISKYLSWLQQKPDGTIKRLINAAVILDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYTSYPWTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:46)
Show buried residues

Minimal score value
-3.6413
Maximal score value
2.4731
Average score
-0.6065
Total score value
-132.8176

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4185
2 V H -0.8223
3 Q H -1.4850
4 L H 0.0000
5 Q H -2.0333
6 Q H -1.4004
7 P H -0.9739
8 G H -0.9505
9 A H 0.0160
11 E H 0.6347
12 F H 1.3596
13 V H -0.0731
14 R H -1.7393
15 P H -1.4931
16 G H -1.1744
17 A H -0.9193
18 S H -0.2335
19 V H 0.0000
20 I H 1.7471
21 L H 0.0000
22 S H 0.0513
23 C H 0.0000
24 K H -1.2628
25 A H 0.0000
26 S H -0.9946
27 G H -0.9118
28 Y H -0.4331
29 T H -0.4913
30 F H 0.0000
35 T H -1.3142
36 N H -1.1445
37 Y H 0.0745
38 W H 0.0475
39 I H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.8696
45 R H -1.3338
46 P H -1.1381
47 G H -1.5344
48 R H -2.3582
49 G H -1.4728
50 L H 0.0000
51 E H -0.9857
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 R H -0.8523
56 I H 0.0000
57 I H -0.9459
58 P H 0.0000
59 N H -2.1427
62 S H -1.7799
63 G H -1.9192
64 D H -2.4919
65 T H -1.7286
66 K H -2.3441
67 Y H -1.8580
68 N H 0.0000
69 E H -3.6413
70 R H -3.2904
71 F H 0.0000
72 K H -3.2150
74 S H -1.7473
75 K H -1.5279
76 A H 0.0000
77 T H -0.3468
78 L H 0.0000
79 T H -0.3085
80 A H -0.7565
81 A H -1.1328
82 K H -2.1672
83 S H -1.0902
84 S H -0.8578
85 S H -0.9386
86 T H 0.0000
87 A H 0.0000
88 Y H 0.4993
89 M H 0.0000
90 Q H 0.3793
91 L H 0.0000
92 S H -0.3051
93 S H -0.8221
94 L H 0.0000
95 T H -1.0253
96 S H -1.0152
97 E H -1.2236
98 D H 0.0000
99 S H -0.2987
100 A H 0.0000
101 V H -0.0045
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 T H 0.0000
106 R H 0.0000
107 P H 0.0108
116 D H -0.3696
117 Y H 0.0699
118 W H -0.4176
119 G H 0.0000
120 Q H -1.7548
121 G H 0.0000
122 T H 0.0000
123 T H -0.0474
124 L H 0.0000
125 T H 0.1503
126 V H 0.0000
127 S H -0.5683
128 S H -0.7563
1 D L -2.3135
2 I L 0.0000
3 Q L -2.2563
4 M L 0.0000
5 T L -1.3017
6 Q L -1.0417
7 S L -0.8166
8 P L -0.5333
9 S L -0.7446
10 S L -0.8964
11 L L -0.4159
12 S L -0.5911
13 A L 0.0000
14 S L -0.5346
15 L L -0.1023
16 G L -1.1640
17 E L -1.8945
18 R L -2.3561
19 V L 0.0000
20 S L -0.6146
21 L L 0.0000
22 T L -0.8034
23 C L 0.0000
24 R L -2.8270
25 A L 0.0000
26 S L -2.2771
27 Q L -2.8946
28 E L -2.8116
29 I L 0.0000
36 S L -1.0151
37 K L -0.6171
38 Y L 0.7550
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 L L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.5606
46 P L -1.3765
47 D L -2.2712
48 G L -1.5377
49 T L -1.3320
50 I L 0.0000
51 K L -1.0314
52 R L -0.7120
53 L L 0.0000
54 I L 0.0000
55 N L 0.8269
56 A L 0.9952
57 A L 0.0000
65 V L 1.7708
66 I L 2.4731
67 L L 0.9233
68 D L -0.1271
69 S L -0.3101
70 G L -0.8294
71 V L 0.0000
72 P L -1.1147
74 K L -1.9042
75 R L -1.4769
76 F L 0.0000
77 S L -0.0152
78 G L 0.5496
79 S L -0.1175
80 R L -1.2372
83 S L -1.1045
84 G L -1.3529
85 S L -2.0263
86 D L -1.8800
87 Y L 0.0000
88 S L -0.6027
89 L L 0.0000
90 T L -0.6195
91 I L 0.0000
92 S L -1.5721
93 S L -1.4837
94 L L 0.0000
95 E L -1.8223
96 S L -1.0577
97 E L -1.8894
98 D L 0.0000
99 F L -0.6782
100 A L 0.0000
101 D L -0.9998
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L 0.6762
108 T L 0.2474
109 S L -0.0533
114 Y L -0.0281
115 P L -0.9476
116 W L -0.1768
117 T L -0.4669
118 F L -0.2518
119 G L 0.0000
120 G L -1.0632
121 G L 0.0000
122 T L 0.0000
123 K L -1.5475
124 L L 0.0000
125 E L -0.9295
126 I L 0.7966
127 K L -0.8885
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Laboratory of Theory of Biopolymers 2018