| Chain sequence(s) |
H: QVQLQQPGAEFVRPGASVILSCKASGYTFTNYWIHWVKQRPGRGLEWIGRIIPNSGDTKYNERFKSKATLTAAKSSSTAYMQLSSLTSEDSAVYFCTRPDYWGQGTTLTVSS
L: DIQMTQSPSSLSASLGERVSLTCRASQEISKYLSWLQQKPDGTIKRLINAAVILDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYTSYPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:45)
[INFO] Main: Simulation completed successfully. (00:01:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4185 | |
| 2 | V | H | -0.8223 | |
| 3 | Q | H | -1.4850 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.0333 | |
| 6 | Q | H | -1.4004 | |
| 7 | P | H | -0.9739 | |
| 8 | G | H | -0.9505 | |
| 9 | A | H | 0.0160 | |
| 11 | E | H | 0.6347 | |
| 12 | F | H | 1.3596 | |
| 13 | V | H | -0.0731 | |
| 14 | R | H | -1.7393 | |
| 15 | P | H | -1.4931 | |
| 16 | G | H | -1.1744 | |
| 17 | A | H | -0.9193 | |
| 18 | S | H | -0.2335 | |
| 19 | V | H | 0.0000 | |
| 20 | I | H | 1.7471 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | 0.0513 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.2628 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9946 | |
| 27 | G | H | -0.9118 | |
| 28 | Y | H | -0.4331 | |
| 29 | T | H | -0.4913 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.3142 | |
| 36 | N | H | -1.1445 | |
| 37 | Y | H | 0.0745 | |
| 38 | W | H | 0.0475 | |
| 39 | I | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.8696 | |
| 45 | R | H | -1.3338 | |
| 46 | P | H | -1.1381 | |
| 47 | G | H | -1.5344 | |
| 48 | R | H | -2.3582 | |
| 49 | G | H | -1.4728 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9857 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | R | H | -0.8523 | |
| 56 | I | H | 0.0000 | |
| 57 | I | H | -0.9459 | |
| 58 | P | H | 0.0000 | |
| 59 | N | H | -2.1427 | |
| 62 | S | H | -1.7799 | |
| 63 | G | H | -1.9192 | |
| 64 | D | H | -2.4919 | |
| 65 | T | H | -1.7286 | |
| 66 | K | H | -2.3441 | |
| 67 | Y | H | -1.8580 | |
| 68 | N | H | 0.0000 | |
| 69 | E | H | -3.6413 | |
| 70 | R | H | -3.2904 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.2150 | |
| 74 | S | H | -1.7473 | |
| 75 | K | H | -1.5279 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.3468 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3085 | |
| 80 | A | H | -0.7565 | |
| 81 | A | H | -1.1328 | |
| 82 | K | H | -2.1672 | |
| 83 | S | H | -1.0902 | |
| 84 | S | H | -0.8578 | |
| 85 | S | H | -0.9386 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | 0.4993 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | 0.3793 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.3051 | |
| 93 | S | H | -0.8221 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.0253 | |
| 96 | S | H | -1.0152 | |
| 97 | E | H | -1.2236 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.2987 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.0045 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | T | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | P | H | 0.0108 | |
| 116 | D | H | -0.3696 | |
| 117 | Y | H | 0.0699 | |
| 118 | W | H | -0.4176 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.7548 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.0474 | |
| 124 | L | H | 0.0000 | |
| 125 | T | H | 0.1503 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5683 | |
| 128 | S | H | -0.7563 | |
| 1 | D | L | -2.3135 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2563 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3017 | |
| 6 | Q | L | -1.0417 | |
| 7 | S | L | -0.8166 | |
| 8 | P | L | -0.5333 | |
| 9 | S | L | -0.7446 | |
| 10 | S | L | -0.8964 | |
| 11 | L | L | -0.4159 | |
| 12 | S | L | -0.5911 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.5346 | |
| 15 | L | L | -0.1023 | |
| 16 | G | L | -1.1640 | |
| 17 | E | L | -1.8945 | |
| 18 | R | L | -2.3561 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.6146 | |
| 21 | L | L | 0.0000 | |
| 22 | T | L | -0.8034 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.8270 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.2771 | |
| 27 | Q | L | -2.8946 | |
| 28 | E | L | -2.8116 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -1.0151 | |
| 37 | K | L | -0.6171 | |
| 38 | Y | L | 0.7550 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | L | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.5606 | |
| 46 | P | L | -1.3765 | |
| 47 | D | L | -2.2712 | |
| 48 | G | L | -1.5377 | |
| 49 | T | L | -1.3320 | |
| 50 | I | L | 0.0000 | |
| 51 | K | L | -1.0314 | |
| 52 | R | L | -0.7120 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | N | L | 0.8269 | |
| 56 | A | L | 0.9952 | |
| 57 | A | L | 0.0000 | |
| 65 | V | L | 1.7708 | |
| 66 | I | L | 2.4731 | |
| 67 | L | L | 0.9233 | |
| 68 | D | L | -0.1271 | |
| 69 | S | L | -0.3101 | |
| 70 | G | L | -0.8294 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.1147 | |
| 74 | K | L | -1.9042 | |
| 75 | R | L | -1.4769 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.0152 | |
| 78 | G | L | 0.5496 | |
| 79 | S | L | -0.1175 | |
| 80 | R | L | -1.2372 | |
| 83 | S | L | -1.1045 | |
| 84 | G | L | -1.3529 | |
| 85 | S | L | -2.0263 | |
| 86 | D | L | -1.8800 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.6027 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6195 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.5721 | |
| 93 | S | L | -1.4837 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.8223 | |
| 96 | S | L | -1.0577 | |
| 97 | E | L | -1.8894 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.6782 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -0.9998 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.6762 | |
| 108 | T | L | 0.2474 | |
| 109 | S | L | -0.0533 | |
| 114 | Y | L | -0.0281 | |
| 115 | P | L | -0.9476 | |
| 116 | W | L | -0.1768 | |
| 117 | T | L | -0.4669 | |
| 118 | F | L | -0.2518 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.0632 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.5475 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.9295 | |
| 126 | I | L | 0.7966 | |
| 127 | K | L | -0.8885 |