| Chain sequence(s) |
A: MSNWLAEDDLGSRVGATPLSPLGAVNAYENA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8100 | |
| 2 | S | A | 0.2565 | |
| 3 | N | A | -0.1604 | |
| 4 | W | A | 1.2301 | |
| 5 | L | A | 1.3429 | |
| 6 | A | A | -0.5831 | |
| 7 | E | A | -2.0900 | |
| 8 | D | A | -2.0676 | |
| 9 | D | A | -2.0734 | |
| 10 | L | A | -0.4246 | |
| 11 | G | A | -1.2830 | |
| 12 | S | A | -1.1755 | |
| 13 | R | A | -1.6029 | |
| 14 | V | A | 0.6501 | |
| 15 | G | A | 0.0675 | |
| 16 | A | A | 0.2468 | |
| 17 | T | A | 0.1913 | |
| 18 | P | A | 0.3075 | |
| 19 | L | A | 1.2813 | |
| 20 | S | A | 0.6936 | |
| 21 | P | A | 0.8345 | |
| 22 | L | A | 1.8984 | |
| 23 | G | A | 1.1011 | |
| 24 | A | A | 0.9613 | |
| 25 | V | A | 1.3265 | |
| 26 | N | A | -0.5441 | |
| 27 | A | A | -0.1452 | |
| 28 | Y | A | 0.3754 | |
| 29 | E | A | -1.7627 | |
| 30 | N | A | -1.6849 | |
| 31 | A | A | -0.7941 |