| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIAYWEPGIGGEAIWLRVPGSERSYDLTGLKPGTEYAVWIHGVKGGASSPPLIARFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0706 | |
| 2 | L | A | 0.4552 | |
| 3 | P | A | -0.1953 | |
| 4 | A | A | -0.4970 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.0982 | |
| 7 | N | A | -1.3240 | |
| 8 | L | A | -0.0029 | |
| 9 | V | A | 0.9039 | |
| 10 | V | A | 0.0120 | |
| 11 | S | A | -0.6280 | |
| 12 | R | A | -2.0197 | |
| 13 | V | A | -1.0392 | |
| 14 | T | A | -1.8056 | |
| 15 | E | A | -3.0736 | |
| 16 | D | A | -2.7790 | |
| 17 | S | A | -2.1052 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2189 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4021 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.3512 | |
| 24 | A | A | -1.4417 | |
| 25 | P | A | -1.4179 | |
| 26 | D | A | -2.2785 | |
| 27 | A | A | -1.4277 | |
| 28 | A | A | -1.1713 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.5345 | |
| 31 | S | A | 0.0000 | |
| 32 | F | A | 0.0000 | |
| 33 | N | A | -0.6462 | |
| 34 | I | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | Y | A | 0.5772 | |
| 37 | W | A | -0.2334 | |
| 38 | E | A | -0.9822 | |
| 39 | P | A | -0.7329 | |
| 40 | G | A | -0.0583 | |
| 41 | I | A | 1.0374 | |
| 42 | G | A | -0.1638 | |
| 43 | G | A | -0.5390 | |
| 44 | E | A | -1.3284 | |
| 45 | A | A | -0.0859 | |
| 46 | I | A | 1.0963 | |
| 47 | W | A | 1.0923 | |
| 48 | L | A | 0.1135 | |
| 49 | R | A | -1.6219 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.5530 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.6275 | |
| 54 | E | A | -1.7223 | |
| 55 | R | A | -1.1648 | |
| 56 | S | A | -0.6519 | |
| 57 | Y | A | -0.7132 | |
| 58 | D | A | -1.6447 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3580 | |
| 61 | G | A | -1.5137 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.1127 | |
| 64 | P | A | -2.6896 | |
| 65 | G | A | -2.0019 | |
| 66 | T | A | -2.0210 | |
| 67 | E | A | -2.5196 | |
| 68 | Y | A | 0.0000 | |
| 69 | A | A | 0.0000 | |
| 70 | V | A | 0.0000 | |
| 71 | W | A | 1.1559 | |
| 72 | I | A | 0.0000 | |
| 73 | H | A | -0.3199 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.2913 | |
| 76 | K | A | -1.6929 | |
| 77 | G | A | -1.4048 | |
| 78 | G | A | -1.1438 | |
| 79 | A | A | -0.6172 | |
| 80 | S | A | -0.3765 | |
| 81 | S | A | 0.0000 | |
| 82 | P | A | 0.2415 | |
| 83 | P | A | 0.2330 | |
| 84 | L | A | 0.7624 | |
| 85 | I | A | 1.4351 | |
| 86 | A | A | 0.2559 | |
| 87 | R | A | -1.6010 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -1.8264 | |
| 90 | T | A | -2.0644 |