Project name: 1346

Status: done

Started: 2025-06-25 14:07:10
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Chain sequence(s) H: EVQLLESGGGSVQPGGSLRLSCAASGVTYSHYWLGWFRQAPGKEREGVAAIYTNDGTTYYADSVKGRFTISLDNPKNTLYLQMSSLTAEDTAVYYCALRPNDGSWFSPLQPYHYNYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:43)
Show buried residues

Minimal score value
-3.4669
Maximal score value
1.6198
Average score
-0.7309
Total score value
-92.8235

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9635
2 V H -1.2747
3 Q H -1.2144
4 L H 0.0000
5 L H 0.6374
6 E H 0.0000
7 S H -0.6727
8 G H -1.1764
9 G H -1.1937
11 G H -0.9434
12 S H -0.7807
13 V H -0.7613
14 Q H -1.5531
15 P H -1.2078
16 G H -1.1215
17 G H -0.9128
18 S H -0.9887
19 L H -1.1284
20 R H -2.0201
21 L H 0.0000
22 S H -0.3682
23 C H 0.0000
24 A H -0.2462
25 A H -0.5158
26 S H -0.6943
27 G H -0.7968
28 V H -0.1899
29 T H 0.3012
30 Y H 0.2200
35 S H -0.7021
36 H H -1.4791
37 Y H 0.0000
38 W H 0.0000
39 L H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.9833
45 A H -1.8460
46 P H -1.3538
47 G H -1.8150
48 K H -3.2667
49 E H -3.4669
50 R H -2.4325
51 E H -2.4423
52 G H -1.0416
53 V H 0.0000
54 A H 0.0000
55 A H 0.0000
56 I H 0.0000
57 Y H 0.0000
58 T H -1.0686
59 N H -1.5738
62 D H -2.2979
63 G H -1.3184
64 T H -0.6041
65 T H -0.1226
66 Y H 0.1734
67 Y H -0.6540
68 A H -1.3518
69 D H -2.4446
70 S H -1.7887
71 V H 0.0000
72 K H -2.5400
74 G H -1.7256
75 R H -1.5185
76 F H 0.0000
77 T H -0.7270
78 I H 0.0000
79 S H -0.2002
80 L H -0.6079
81 D H -1.5099
82 N H -2.2722
83 P H -1.8746
84 K H -2.5745
85 N H -1.9613
86 T H -1.0695
87 L H 0.0000
88 Y H -0.3239
89 L H 0.0000
90 Q H -1.0440
91 M H 0.0000
92 S H -0.8794
93 S H -0.8550
94 L H 0.0000
95 T H -1.1382
96 A H -1.1553
97 E H -1.8546
98 D H 0.0000
99 T H -0.8234
100 A H 0.0000
101 V H -0.5224
102 Y H 0.0000
103 Y H -0.2611
104 C H 0.0000
105 A H 0.0000
106 L H 0.0000
107 R H 0.0000
108 P H -1.0976
109 N H -1.9081
110 D H -2.2740
111 G H -1.2072
111A S H -0.0910
111B W H 1.3267
111C F H 1.6198
112D S H 1.0280
112C P H 0.0000
112B L H 0.3404
112A Q H -0.5039
112 P H -0.5024
113 Y H 0.6510
114 H H -0.2957
115 Y H 0.0000
116 N H -0.8992
117 Y H -0.4533
118 W H -0.0344
119 G H -0.1856
120 Q H -0.9579
121 G H -0.5498
122 T H 0.0000
123 Q H -1.3001
124 V H 0.0000
125 T H -0.8711
126 V H 0.0000
127 S H -0.9811
128 S H -0.7923
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Laboratory of Theory of Biopolymers 2018