| Chain sequence(s) |
A: MATPGTQEPSSSKLLSRPCFCGCHLRGEEPDRVLPAAGAHLPFPFSRDARLRASRNELFFHLKPQAWVFHPRDVFCFGLGVDWPLAERVRDSPVTAQGGREAAPPRCRPATQPARLAQRVASRFRKRRPLIGLESWGLLKALRGGFPPSGEGLPALPGLKSAILRASLVTFLLVGITSSPPPLVYDL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:05)
[INFO] Main: Simulation completed successfully. (00:06:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6085 | |
| 2 | A | A | 0.3298 | |
| 3 | T | A | 0.0308 | |
| 4 | P | A | -0.5160 | |
| 5 | G | A | -1.2311 | |
| 6 | T | A | -1.1640 | |
| 7 | Q | A | -2.5445 | |
| 8 | E | A | -2.8796 | |
| 9 | P | A | -1.8852 | |
| 10 | S | A | -1.4129 | |
| 11 | S | A | -1.0344 | |
| 12 | S | A | -1.1854 | |
| 13 | K | A | -1.6982 | |
| 14 | L | A | 0.1343 | |
| 15 | L | A | 1.3115 | |
| 16 | S | A | 0.3416 | |
| 17 | R | A | 0.2656 | |
| 18 | P | A | 0.7443 | |
| 19 | C | A | 1.5412 | |
| 20 | F | A | 1.9310 | |
| 21 | C | A | 0.0000 | |
| 22 | G | A | -0.9069 | |
| 23 | C | A | -0.1766 | |
| 24 | H | A | -1.7535 | |
| 25 | L | A | 0.0000 | |
| 26 | R | A | -2.2942 | |
| 27 | G | A | -2.2243 | |
| 28 | E | A | -3.4119 | |
| 29 | E | A | -3.9597 | |
| 30 | P | A | -3.0709 | |
| 31 | D | A | -3.3213 | |
| 32 | R | A | -3.0879 | |
| 33 | V | A | 0.0000 | |
| 34 | L | A | -1.2815 | |
| 35 | P | A | -1.4432 | |
| 36 | A | A | -0.6899 | |
| 37 | A | A | 0.0000 | |
| 38 | G | A | -0.9534 | |
| 39 | A | A | -0.6175 | |
| 40 | H | A | -0.9011 | |
| 41 | L | A | -0.0860 | |
| 42 | P | A | 0.4949 | |
| 43 | F | A | 0.8130 | |
| 44 | P | A | 0.6187 | |
| 45 | F | A | 1.4843 | |
| 46 | S | A | 0.2360 | |
| 47 | R | A | 0.0000 | |
| 48 | D | A | -0.6873 | |
| 49 | A | A | -0.1423 | |
| 50 | R | A | 0.0000 | |
| 51 | L | A | -1.2227 | |
| 52 | R | A | -2.6076 | |
| 53 | A | A | 0.0000 | |
| 54 | S | A | -1.3030 | |
| 55 | R | A | -1.9887 | |
| 56 | N | A | -1.7609 | |
| 57 | E | A | 0.0000 | |
| 58 | L | A | -0.5543 | |
| 59 | F | A | 1.0493 | |
| 60 | F | A | 0.3735 | |
| 61 | H | A | -0.7191 | |
| 62 | L | A | -1.3426 | |
| 63 | K | A | -1.6481 | |
| 64 | P | A | -1.3216 | |
| 65 | Q | A | 0.0000 | |
| 66 | A | A | -0.9049 | |
| 67 | W | A | 0.0155 | |
| 68 | V | A | 0.0000 | |
| 69 | F | A | 0.0000 | |
| 70 | H | A | 0.0000 | |
| 71 | P | A | 0.0913 | |
| 72 | R | A | -0.1367 | |
| 73 | D | A | 0.0000 | |
| 74 | V | A | 0.5735 | |
| 75 | F | A | 0.8166 | |
| 76 | C | A | 0.0000 | |
| 77 | F | A | 0.0000 | |
| 78 | G | A | 0.9506 | |
| 79 | L | A | 1.7331 | |
| 80 | G | A | 1.0223 | |
| 81 | V | A | 1.1429 | |
| 82 | D | A | -0.7672 | |
| 83 | W | A | -0.8827 | |
| 84 | P | A | -0.7443 | |
| 85 | L | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | E | A | -2.2024 | |
| 88 | R | A | -2.7432 | |
| 89 | V | A | 0.0000 | |
| 90 | R | A | 0.0000 | |
| 91 | D | A | -2.7691 | |
| 92 | S | A | 0.0000 | |
| 93 | P | A | -0.4419 | |
| 94 | V | A | 0.0922 | |
| 95 | T | A | -0.5249 | |
| 96 | A | A | -0.2861 | |
| 97 | Q | A | -2.0606 | |
| 98 | G | A | -1.7120 | |
| 99 | G | A | -2.2302 | |
| 100 | R | A | -3.2745 | |
| 101 | E | A | -3.1137 | |
| 102 | A | A | -1.8587 | |
| 103 | A | A | -2.0763 | |
| 104 | P | A | 0.0000 | |
| 105 | P | A | -1.7780 | |
| 106 | R | A | 0.0000 | |
| 107 | C | A | -1.5135 | |
| 108 | R | A | -2.3720 | |
| 109 | P | A | -1.5426 | |
| 110 | A | A | 0.0000 | |
| 111 | T | A | -1.9056 | |
| 112 | Q | A | -2.3460 | |
| 113 | P | A | 0.0000 | |
| 114 | A | A | -2.5887 | |
| 115 | R | A | -3.4237 | |
| 116 | L | A | 0.0000 | |
| 117 | A | A | 0.0000 | |
| 118 | Q | A | -3.4153 | |
| 119 | R | A | -3.2280 | |
| 120 | V | A | 0.0000 | |
| 121 | A | A | 0.0000 | |
| 122 | S | A | -3.3148 | |
| 123 | R | A | -4.1047 | |
| 124 | F | A | -3.3980 | |
| 125 | R | A | -4.3079 | |
| 126 | K | A | -4.5984 | |
| 127 | R | A | -4.2283 | |
| 128 | R | A | -3.5358 | |
| 129 | P | A | -1.2040 | |
| 130 | L | A | 0.9485 | |
| 131 | I | A | 1.5254 | |
| 132 | G | A | -0.5992 | |
| 133 | L | A | 0.0000 | |
| 134 | E | A | -0.2776 | |
| 135 | S | A | 0.3513 | |
| 136 | W | A | 0.0000 | |
| 137 | G | A | 0.2577 | |
| 138 | L | A | 1.3621 | |
| 139 | L | A | 1.0934 | |
| 140 | K | A | 0.0000 | |
| 141 | A | A | 1.2772 | |
| 142 | L | A | 1.2364 | |
| 143 | R | A | 0.0000 | |
| 144 | G | A | 0.0000 | |
| 145 | G | A | 0.6851 | |
| 146 | F | A | 1.2606 | |
| 147 | P | A | 0.0000 | |
| 148 | P | A | 0.0000 | |
| 149 | S | A | 0.5924 | |
| 150 | G | A | 0.0000 | |
| 151 | E | A | -0.2607 | |
| 152 | G | A | 0.0898 | |
| 153 | L | A | 1.0919 | |
| 154 | P | A | 0.0886 | |
| 155 | A | A | 0.3411 | |
| 156 | L | A | 1.3000 | |
| 157 | P | A | 0.2835 | |
| 158 | G | A | 0.1285 | |
| 159 | L | A | 0.7131 | |
| 160 | K | A | 0.1554 | |
| 161 | S | A | -0.2119 | |
| 162 | A | A | 0.1107 | |
| 163 | I | A | 0.0000 | |
| 164 | L | A | 0.7279 | |
| 165 | R | A | -0.0289 | |
| 166 | A | A | 1.2667 | |
| 167 | S | A | 1.6464 | |
| 168 | L | A | 3.1762 | |
| 169 | V | A | 3.3886 | |
| 170 | T | A | 0.0000 | |
| 171 | F | A | 3.6830 | |
| 172 | L | A | 4.2082 | |
| 173 | L | A | 3.2281 | |
| 174 | V | A | 0.0000 | |
| 175 | G | A | 1.7771 | |
| 176 | I | A | 2.6139 | |
| 177 | T | A | 0.7422 | |
| 178 | S | A | 0.0030 | |
| 179 | S | A | 0.6790 | |
| 180 | P | A | 0.2535 | |
| 181 | P | A | -0.2707 | |
| 182 | P | A | 0.3895 | |
| 183 | L | A | 1.4780 | |
| 184 | V | A | 2.3131 | |
| 185 | Y | A | 2.0508 | |
| 186 | D | A | 0.1096 | |
| 187 | L | A | 1.6098 |