Project name: 2EH7

Status: done

Started: 2026-03-30 04:29:31
Settings
Chain sequence(s) H: QVQLVQSGAEVVKPGASVKVSCKASGYAFSSSWMNWVRQAPGQGLEWIGRIYPGDGDTNYAQKFQGKATLTADKSTSTAYMELSSLRSEDTAVYFCAREYDEAYWGQGTLVTVSS
L: DIQMTQTPLSLSVTPGQPASISCKSSQSLLYSNGKTYLNWLLQKPGQSPKRLIYLVSKLDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCVQGTHFPQTFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:25)
Show buried residues

Minimal score value
-2.9795
Maximal score value
1.4719
Average score
-0.6323
Total score value
-143.5425

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4638
2 V H 0.0000
3 Q H -0.9186
4 L H 0.0000
5 V H 0.5327
6 Q H 0.0000
7 S H -0.4020
8 G H -0.3522
9 A H 0.4541
11 E H 0.5273
12 V H 1.4719
13 V H -0.1557
14 K H -1.7672
15 P H -2.0513
16 G H -1.4503
17 A H -1.0493
18 S H -1.2061
19 V H 0.0000
20 K H -1.8504
21 V H 0.0000
22 S H -0.4389
23 C H 0.0000
24 K H -0.7134
25 A H 0.0000
26 S H -0.7541
27 G H -0.9718
28 Y H -0.3402
29 A H -0.2081
30 F H 0.0000
35 S H -0.9604
36 S H -0.3100
37 S H 0.0000
38 W H -0.0213
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H -0.4108
44 Q H -0.6178
45 A H 0.0000
46 P H -0.7645
47 G H -1.2141
48 Q H -1.7591
49 G H -1.1229
50 L H 0.0000
51 E H -0.8583
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 R H -0.6215
56 I H 0.0000
57 Y H -0.7340
58 P H 0.0000
59 G H -1.5299
62 D H -2.4142
63 G H -1.8476
64 D H -1.5835
65 T H -0.8781
66 N H -0.6192
67 Y H -0.9278
68 A H 0.0000
69 Q H -2.7041
70 K H -2.7278
71 F H 0.0000
72 Q H -2.4057
74 G H -1.6381
75 K H -1.5072
76 A H 0.0000
77 T H -0.8124
78 L H 0.0000
79 T H -0.4574
80 A H -1.0138
81 D H -1.5367
82 K H -2.2434
83 S H -1.1890
84 T H -0.9814
85 S H -1.1541
86 T H 0.0000
87 A H 0.0000
88 Y H -0.3898
89 M H 0.0000
90 E H -1.1266
91 L H 0.0000
92 S H -1.0519
93 S H -1.1809
94 L H 0.0000
95 R H -2.8257
96 S H -2.2471
97 E H -2.5337
98 D H -1.6437
99 T H -0.7006
100 A H 0.0000
101 V H 0.4144
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 E H -0.8395
108 Y H -0.9535
114 D H -2.1844
115 E H -1.9800
116 A H -1.2590
117 Y H -0.9065
118 W H -0.3476
119 G H 0.0000
120 Q H -0.9615
121 G H -0.2678
122 T H 0.0000
123 L H 0.8775
124 V H 0.0000
125 T H 0.1296
126 V H 0.0000
127 S H -0.6780
128 S H -0.8357
1 D L -2.0136
2 I L 0.0000
3 Q L -2.1744
4 M L 0.0000
5 T L -0.9348
6 Q L 0.0000
7 T L 0.0341
8 P L 0.3569
9 L L 1.1205
10 S L 0.0979
11 L L -0.0809
12 S L -0.6724
13 V L -0.9465
14 T L -1.3224
15 P L -1.4218
16 G L -1.6552
17 Q L -1.9446
18 P L -1.8180
19 A L 0.0000
20 S L -0.6796
21 I L 0.0000
22 S L -0.6620
23 C L 0.0000
24 K L -2.2287
25 S L 0.0000
26 S L -1.7816
27 Q L -1.9236
28 S L -0.6300
29 L L 0.0000
30 L L 0.9932
31 Y L 0.4848
32 S L -0.4167
34 N L -1.4014
35 G L -0.9971
36 K L -0.8062
37 T L 0.1195
38 Y L 0.3514
39 L L 0.0000
40 N L -0.0899
41 W L 0.0000
42 L L 0.0000
43 L L 0.0000
44 Q L -1.1577
45 K L -1.5404
46 P L -0.8908
47 G L -1.2398
48 Q L -1.7585
49 S L 0.0000
50 P L 0.0000
51 K L -1.8364
52 R L 0.0000
53 L L -0.4870
54 I L 0.0000
55 Y L -0.4728
56 L L -0.2791
57 V L -0.2939
65 S L -0.7705
66 K L -1.3731
67 L L -0.6656
68 D L -1.1004
69 S L -0.8763
70 G L -0.6465
71 V L -0.5920
72 P L -0.9544
74 D L -2.0089
75 R L 0.0000
76 F L 0.0000
77 S L -1.1114
78 G L -0.6821
79 S L -0.8116
80 G L -1.0358
83 S L -0.6556
84 G L -0.4817
85 T L -1.2850
86 D L -1.9117
87 F L 0.0000
88 T L -0.9089
89 L L 0.0000
90 K L -1.4034
91 I L 0.0000
92 S L -2.0593
93 R L -2.9795
94 V L 0.0000
95 E L -2.0312
96 A L -1.3250
97 E L -1.9515
98 D L 0.0000
99 V L -0.5643
100 G L 0.0000
101 V L -0.1574
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 V L 0.0000
106 Q L 0.0000
107 G L -0.0510
108 T L 0.0000
109 H L 0.1414
114 F L 1.1013
115 P L 0.0000
116 Q L -0.3405
117 T L -0.7407
118 F L 0.0000
119 G L 0.0000
120 G L -0.6796
121 G L 0.0000
122 T L 0.0000
123 K L -0.6563
124 V L 0.0000
125 E L -0.7574
126 I L -0.5806
127 K L -1.4710
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Laboratory of Theory of Biopolymers 2018