| Chain sequence(s) |
A: PQRARCNSTRCALDCWLANWRTGNCDGSTCRCH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:17)
[INFO] Main: Simulation completed successfully. (00:00:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 41 | P | A | -1.9061 | |
| 42 | Q | A | -2.3090 | |
| 43 | R | A | -2.9359 | |
| 44 | A | A | -2.7903 | |
| 45 | R | A | -3.0706 | |
| 46 | C | A | 0.0000 | |
| 47 | N | A | -2.8020 | |
| 48 | S | A | -1.7894 | |
| 49 | T | A | -1.3506 | |
| 50 | R | A | -2.7474 | |
| 51 | C | A | 0.0000 | |
| 52 | A | A | -0.3012 | |
| 53 | L | A | 1.2212 | |
| 54 | D | A | -0.4312 | |
| 55 | C | A | 0.0000 | |
| 56 | W | A | 1.3935 | |
| 57 | L | A | 1.6964 | |
| 58 | A | A | 0.4230 | |
| 59 | N | A | -0.5583 | |
| 60 | W | A | 0.0287 | |
| 61 | R | A | -1.2021 | |
| 62 | T | A | -1.3229 | |
| 63 | G | A | -1.6923 | |
| 64 | N | A | -2.5669 | |
| 65 | C | A | -2.4396 | |
| 66 | D | A | -2.1500 | |
| 67 | G | A | -1.4372 | |
| 68 | S | A | -1.7949 | |
| 69 | T | A | -2.5842 | |
| 70 | C | A | 0.0000 | |
| 71 | R | A | -2.9278 | |
| 72 | C | A | -1.9646 | |
| 73 | H | A | -1.8689 |