| Chain sequence(s) |
A: GFPCGESCVYLPCFTAAIGCSCKSKVCYKN
B: GFPCGESCVYIPCFTAAIGCSSCKSKVCYKN input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:25)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6880 | |
| 2 | F | A | 0.9658 | |
| 3 | P | A | 0.0208 | |
| 4 | C | A | 0.2961 | |
| 5 | G | A | -0.7519 | |
| 6 | E | A | -0.5601 | |
| 7 | S | A | 0.0404 | |
| 8 | C | A | 0.0000 | |
| 9 | V | A | 2.0514 | |
| 10 | Y | A | 2.5679 | |
| 11 | L | A | 2.6780 | |
| 12 | P | A | 1.4801 | |
| 13 | C | A | 0.0000 | |
| 14 | F | A | 2.2524 | |
| 15 | T | A | 1.2648 | |
| 16 | A | A | 1.1238 | |
| 17 | A | A | 1.4281 | |
| 18 | I | A | 1.9440 | |
| 19 | G | A | 0.3272 | |
| 20 | C | A | 0.0000 | |
| 21 | S | A | -0.4600 | |
| 22 | C | A | -0.4761 | |
| 23 | K | A | -1.9181 | |
| 24 | S | A | -1.3076 | |
| 25 | K | A | -1.1260 | |
| 26 | V | A | -0.5523 | |
| 27 | C | A | 0.0000 | |
| 28 | Y | A | -0.7684 | |
| 29 | K | A | -1.2095 | |
| 30 | N | A | -1.5462 | |
| 1 | G | B | -0.6723 | |
| 2 | F | B | 0.9915 | |
| 3 | P | B | 0.0796 | |
| 4 | C | B | 0.3200 | |
| 5 | G | B | -0.3436 | |
| 6 | E | B | -0.3467 | |
| 7 | S | B | 0.0233 | |
| 8 | C | B | 0.0000 | |
| 9 | V | B | 1.6659 | |
| 10 | Y | B | 2.5689 | |
| 11 | I | B | 3.0014 | |
| 12 | P | B | 1.6179 | |
| 13 | C | B | 0.0000 | |
| 14 | F | B | 2.3374 | |
| 15 | T | B | 1.2883 | |
| 16 | A | B | 1.1510 | |
| 17 | A | B | 1.4329 | |
| 18 | I | B | 1.9739 | |
| 19 | G | B | 0.3849 | |
| 20 | C | B | 0.0000 | |
| 21 | S | B | -0.6864 | |
| 22 | C | B | -0.5571 | |
| 23 | K | B | -2.0053 | |
| 24 | S | B | -1.4008 | |
| 25 | K | B | -1.2631 | |
| 26 | V | B | -0.6420 | |
| 27 | C | B | 0.0000 | |
| 28 | Y | B | -0.7837 | |
| 29 | K | B | -1.2174 | |
| 30 | N | B | -1.5727 |