Project name: lanm_A4

Status: done

Started: 2026-07-27 01:22:22
Settings
Chain sequence(s) A: APTTTTKVDIAAFDPDKDGTIELKEALAAASAAFDKLDPDKDGTLEAKELKGRVSEADLKKADPDNDGTLEKKEYLAAVEAQFKAANPDNDGTIEARELASPAGSALVNLIR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-4.1886
Maximal score value
0.0
Average score
-1.5285
Total score value
-171.1975

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.0991
2 P A -0.2992
3 T A -0.2434
4 T A -0.5090
5 T A -0.6973
6 T A -1.1695
7 K A -2.2969
8 V A -1.5959
9 D A -1.9651
10 I A -1.0944
11 A A -1.3155
12 A A -0.7742
13 F A 0.0000
14 D A 0.0000
15 P A -1.9310
16 D A -3.3293
17 K A -3.5693
18 D A -3.4453
19 G A -2.1774
20 T A -1.7114
21 I A 0.0000
22 E A -1.3383
23 L A -0.9872
24 K A -1.6192
25 E A 0.0000
26 A A 0.0000
27 L A -0.2112
28 A A -0.1847
29 A A -0.3026
30 A A 0.0000
31 S A -0.6814
32 A A -0.9020
33 A A 0.0000
34 F A 0.0000
35 D A -3.0115
36 K A -3.0270
37 L A 0.0000
38 D A 0.0000
39 P A -2.7317
40 D A -3.6873
41 K A -4.1045
42 D A -3.6156
43 G A -2.8910
44 T A -2.5385
45 L A 0.0000
46 E A -1.8500
47 A A -2.3231
48 K A -2.7393
49 E A -2.1335
50 L A 0.0000
51 K A -3.1338
52 G A -2.2194
53 R A -2.5387
54 V A -1.8821
55 S A -2.3305
56 E A -3.2291
57 A A -2.4722
58 D A -3.0832
59 L A -2.9303
60 K A -4.1886
61 K A -3.6912
62 A A -2.6845
63 D A 0.0000
64 P A -2.6123
65 D A -3.5596
66 N A -3.8296
67 D A -3.5970
68 G A -2.6115
69 T A -2.3347
70 L A 0.0000
71 E A -2.7244
72 K A -2.3101
73 K A -2.4287
74 E A -2.0164
75 Y A 0.0000
76 L A -0.7408
77 A A -0.7392
78 A A -0.8653
79 V A 0.0000
80 E A -1.0405
81 A A -0.8326
82 Q A -0.8366
83 F A 0.0000
84 K A -2.5783
85 A A -1.3619
86 A A 0.0000
87 N A 0.0000
88 P A -2.0947
89 D A -3.1711
90 N A -3.4755
91 D A -3.4034
92 G A -2.4283
93 T A -1.8557
94 I A 0.0000
95 E A -1.5728
96 A A -1.5227
97 R A -2.1383
98 E A 0.0000
99 L A 0.0000
100 A A -1.2126
101 S A -0.5895
102 P A -0.2862
103 A A -0.5160
104 G A 0.0000
105 S A -0.5398
106 A A -0.6864
107 L A 0.0000
108 V A 0.0000
109 N A -1.7445
110 L A -1.0498
111 I A 0.0000
112 R A -2.4043
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Laboratory of Theory of Biopolymers 2018