| Chain sequence(s) |
A: FEFEFKFK
C: FEFEFKFK B: FEFEFKFK E: FEFEFKFK D: FEFEFKFK G: FEFEFKFK F: FEFEFKFK H: FEFEFKFK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:10:24)
[INFO] Main: Simulation completed successfully. (00:10:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.5043 | |
| 2 | E | A | -1.2199 | |
| 3 | F | A | -0.4102 | |
| 4 | E | A | -1.7114 | |
| 5 | F | A | 0.0000 | |
| 6 | K | A | -2.9473 | |
| 7 | F | A | -1.5637 | |
| 8 | K | A | -2.1115 | |
| 1 | F | B | 0.5914 | |
| 2 | E | B | -1.6987 | |
| 3 | F | B | -1.5997 | |
| 4 | E | B | -2.7342 | |
| 5 | F | B | -1.7179 | |
| 6 | K | B | -2.0087 | |
| 7 | F | B | -0.8351 | |
| 8 | K | B | -1.7328 | |
| 1 | F | C | 1.3536 | |
| 2 | E | C | -0.1563 | |
| 3 | F | C | 1.0935 | |
| 4 | E | C | -0.4006 | |
| 5 | F | C | 0.8124 | |
| 6 | K | C | -0.5592 | |
| 7 | F | C | 0.5271 | |
| 8 | K | C | -0.9511 | |
| 1 | F | D | 0.1334 | |
| 2 | E | D | -1.1982 | |
| 3 | F | D | 0.4624 | |
| 4 | E | D | 0.8967 | |
| 5 | F | D | 1.2031 | |
| 6 | K | D | 0.1687 | |
| 7 | F | D | -0.7068 | |
| 8 | K | D | -1.7363 | |
| 1 | F | E | 1.4157 | |
| 2 | E | E | -0.2715 | |
| 3 | F | E | 0.7776 | |
| 4 | E | E | -0.1537 | |
| 5 | F | E | 0.0653 | |
| 6 | K | E | -1.7400 | |
| 7 | F | E | 0.3837 | |
| 8 | K | E | -1.2640 | |
| 1 | F | F | 1.4457 | |
| 2 | E | F | -0.3826 | |
| 3 | F | F | 0.9044 | |
| 4 | E | F | -0.3777 | |
| 5 | F | F | 0.4713 | |
| 6 | K | F | -0.6334 | |
| 7 | F | F | 0.5071 | |
| 8 | K | F | -1.0910 | |
| 1 | F | G | 1.5352 | |
| 2 | E | G | -0.2640 | |
| 3 | F | G | 1.6027 | |
| 4 | E | G | -0.2364 | |
| 5 | F | G | 0.0913 | |
| 6 | K | G | -2.0630 | |
| 7 | F | G | 0.0000 | |
| 8 | K | G | -2.0615 | |
| 1 | F | H | 0.0000 | |
| 2 | E | H | -1.8650 | |
| 3 | F | H | -0.8845 | |
| 4 | E | H | -1.6989 | |
| 5 | F | H | 0.4080 | |
| 6 | K | H | -1.0690 | |
| 7 | F | H | 0.9363 | |
| 8 | K | H | -0.9228 |