Project name: 2368f20916c60c3

Status: done

Started: 2025-11-20 00:36:27
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Chain sequence(s) A: VQLVESGGGVVKPGGSLRLSCAASGDLFRSYTMSWYRQAPGKERELVATIGSPIYTTTYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCNGRFTLGSWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:13)
Show buried residues

Minimal score value
-3.9852
Maximal score value
2.7685
Average score
-0.4303
Total score value
-49.0568

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 V A 0.8195
3 Q A -0.2834
4 L A 0.6400
5 V A 1.2458
6 E A -0.4030
7 S A -0.7753
8 G A -1.4247
9 G A -0.4448
10 G A 0.2032
11 V A 1.4949
12 V A 0.3120
13 K A -1.5410
14 P A -1.9089
15 G A -1.6185
16 G A -1.0394
17 S A -1.2792
18 L A -0.7979
19 R A -2.1533
20 L A 0.0000
21 S A -0.6559
22 C A 0.0000
23 A A -0.5167
24 A A -0.5091
25 S A -0.8407
26 G A -0.7317
27 D A -1.3067
28 L A 0.3243
29 F A 1.3207
30 R A -0.2819
31 S A 0.0000
32 Y A 1.1070
33 T A 0.3104
34 M A 0.0000
35 S A 0.0000
36 W A 0.0000
37 Y A -0.2715
38 R A 0.0000
39 Q A -1.8793
40 A A 0.0000
41 P A -1.5006
42 G A -2.0558
43 K A -3.5590
44 E A -3.9852
45 R A -3.3254
46 E A -2.2570
47 L A -0.2960
48 V A 0.0000
49 A A 0.0000
50 T A 0.1587
51 I A 0.0000
52 G A 0.5569
53 S A 0.4136
54 P A 0.3780
55 I A 1.0129
56 Y A 1.5857
57 T A 0.7105
58 T A 0.4139
59 T A -0.3005
60 Y A -0.6469
61 A A -1.1533
62 D A -2.5138
63 S A -1.8348
64 V A 0.0000
65 K A -2.6596
66 G A -1.8095
67 R A -1.6623
68 F A 0.0000
69 T A -0.8607
70 I A 0.0000
71 S A -0.1497
72 R A -1.0481
73 D A -1.7858
74 N A -2.3222
75 A A -1.7882
76 K A -2.6574
77 N A -2.3558
78 S A 0.0000
79 L A 0.0000
80 Y A -0.7229
81 L A 0.0000
82 Q A -1.2029
83 M A 0.0000
84 N A -1.5946
85 S A -1.5018
86 L A 0.0000
87 R A -2.9800
88 A A -2.0133
89 E A -2.5227
90 D A 0.0000
91 T A -0.4395
92 A A -0.0850
93 V A 1.4190
94 Y A 0.5679
95 Y A 0.2053
96 C A 0.2174
97 N A -0.5121
98 G A -0.2766
99 R A -0.3764
100 F A 0.9729
101 T A 0.8544
102 L A 1.3157
103 G A 0.5433
104 S A 0.2712
105 W A 0.5736
106 G A -0.3610
107 Q A -1.2024
108 G A -0.3792
109 T A 0.4426
110 L A 2.1957
111 V A 2.7685
112 T A 1.9734
113 V A 2.1771
114 S A 0.7172
115 S A 0.0809
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Laboratory of Theory of Biopolymers 2018