Project name: query_structure

Status: done

Started: 2026-03-17 00:14:40
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Chain sequence(s) A: MVQLQESGGGSVQAGGSLRLSCVASGDTASMYCMGWFRQAPGKEREEVATIDSDGSVSIYDSLKGRFTISKDSANNALYLHMNSLRPEDTANYYCAAGRPPCGSWFLPGYYYYGMDYWGKGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:05)
Show buried residues

Minimal score value
-3.3301
Maximal score value
2.9305
Average score
-0.5807
Total score value
-74.3339

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.1978
2 V A 0.0000
3 Q A -1.6275
4 L A 0.0000
5 Q A -1.5499
6 E A 0.0000
7 S A -0.5743
8 G A -0.8338
9 G A -0.4058
10 G A -0.2547
11 S A -0.3784
12 V A -0.9228
13 Q A -1.7553
14 A A -1.9687
15 G A -1.6496
16 G A -1.3580
17 S A -1.6541
18 L A -1.3362
19 R A -2.2088
20 L A 0.0000
21 S A -0.6479
22 C A 0.0000
23 V A -0.1636
24 A A 0.0000
25 S A -1.2845
26 G A -1.4495
27 D A -1.9780
28 T A -1.2025
29 A A -0.6485
30 S A -0.4380
31 M A 0.0000
32 Y A -0.0367
33 C A 0.0000
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 F A 0.0000
38 R A -1.2997
39 Q A -2.1220
40 A A -1.7791
41 P A -1.3812
42 G A -1.6630
43 K A -2.6579
44 E A -3.3301
45 R A -2.9491
46 E A -1.6230
47 E A -0.3765
48 V A 0.0000
49 A A 0.0000
50 T A 0.2283
51 I A 0.0000
52 D A -1.0303
53 S A -1.1856
54 D A -1.9644
55 G A -1.2632
56 S A -0.5280
57 V A 0.6276
58 S A 0.0857
59 I A -0.2066
60 Y A -0.6734
61 D A -2.0955
62 S A -1.4460
63 L A 0.0000
64 K A -2.4322
65 G A -1.8307
66 R A -1.9007
67 F A 0.0000
68 T A -0.8491
69 I A 0.0000
70 S A -0.4468
71 K A -1.2973
72 D A -1.2698
73 S A -1.1412
74 A A -1.0730
75 N A -1.6736
76 N A -1.3400
77 A A 0.0000
78 L A 0.0000
79 Y A -0.5570
80 L A 0.0000
81 H A -1.4902
82 M A 0.0000
83 N A -2.2916
84 S A -1.7379
85 L A 0.0000
86 R A -3.0733
87 P A -2.1811
88 E A -2.5079
89 D A 0.0000
90 T A -0.9994
91 A A 0.0000
92 N A -0.4279
93 Y A 0.0000
94 Y A -0.6232
95 C A 0.0000
96 A A 0.0000
97 A A 0.0000
98 G A 0.0000
99 R A -0.8050
100 P A -0.1940
101 P A 0.0951
102 C A -0.0050
103 G A 0.9839
104 S A 1.0680
105 W A 1.8226
106 F A 2.6693
107 L A 2.0648
108 P A 1.0226
109 G A 1.1264
110 Y A 2.6672
111 Y A 2.9305
112 Y A 2.5434
113 Y A 1.4737
114 G A 0.0813
115 M A 0.0000
116 D A -1.8051
117 Y A 0.0000
118 W A -0.7902
119 G A -1.1463
120 K A -2.0391
121 G A 0.0000
122 T A -0.1831
123 L A 0.8652
124 V A 0.0000
125 T A -0.5432
126 V A 0.0000
127 S A -1.3257
128 S A -1.0050
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Laboratory of Theory of Biopolymers 2018