| Chain sequence(s) |
A: MVQLQESGGGSVQAGGSLRLSCVASGDTASMYCMGWFRQAPGKEREEVATIDSDGSVSIYDSLKGRFTISKDSANNALYLHMNSLRPEDTANYYCAAGRPPCGSWFLPGYYYYGMDYWGKGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1978 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.6275 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.5499 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.5743 | |
| 8 | G | A | -0.8338 | |
| 9 | G | A | -0.4058 | |
| 10 | G | A | -0.2547 | |
| 11 | S | A | -0.3784 | |
| 12 | V | A | -0.9228 | |
| 13 | Q | A | -1.7553 | |
| 14 | A | A | -1.9687 | |
| 15 | G | A | -1.6496 | |
| 16 | G | A | -1.3580 | |
| 17 | S | A | -1.6541 | |
| 18 | L | A | -1.3362 | |
| 19 | R | A | -2.2088 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.6479 | |
| 22 | C | A | 0.0000 | |
| 23 | V | A | -0.1636 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.2845 | |
| 26 | G | A | -1.4495 | |
| 27 | D | A | -1.9780 | |
| 28 | T | A | -1.2025 | |
| 29 | A | A | -0.6485 | |
| 30 | S | A | -0.4380 | |
| 31 | M | A | 0.0000 | |
| 32 | Y | A | -0.0367 | |
| 33 | C | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | -1.2997 | |
| 39 | Q | A | -2.1220 | |
| 40 | A | A | -1.7791 | |
| 41 | P | A | -1.3812 | |
| 42 | G | A | -1.6630 | |
| 43 | K | A | -2.6579 | |
| 44 | E | A | -3.3301 | |
| 45 | R | A | -2.9491 | |
| 46 | E | A | -1.6230 | |
| 47 | E | A | -0.3765 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | T | A | 0.2283 | |
| 51 | I | A | 0.0000 | |
| 52 | D | A | -1.0303 | |
| 53 | S | A | -1.1856 | |
| 54 | D | A | -1.9644 | |
| 55 | G | A | -1.2632 | |
| 56 | S | A | -0.5280 | |
| 57 | V | A | 0.6276 | |
| 58 | S | A | 0.0857 | |
| 59 | I | A | -0.2066 | |
| 60 | Y | A | -0.6734 | |
| 61 | D | A | -2.0955 | |
| 62 | S | A | -1.4460 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.4322 | |
| 65 | G | A | -1.8307 | |
| 66 | R | A | -1.9007 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.8491 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.4468 | |
| 71 | K | A | -1.2973 | |
| 72 | D | A | -1.2698 | |
| 73 | S | A | -1.1412 | |
| 74 | A | A | -1.0730 | |
| 75 | N | A | -1.6736 | |
| 76 | N | A | -1.3400 | |
| 77 | A | A | 0.0000 | |
| 78 | L | A | 0.0000 | |
| 79 | Y | A | -0.5570 | |
| 80 | L | A | 0.0000 | |
| 81 | H | A | -1.4902 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -2.2916 | |
| 84 | S | A | -1.7379 | |
| 85 | L | A | 0.0000 | |
| 86 | R | A | -3.0733 | |
| 87 | P | A | -2.1811 | |
| 88 | E | A | -2.5079 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.9994 | |
| 91 | A | A | 0.0000 | |
| 92 | N | A | -0.4279 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.6232 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | G | A | 0.0000 | |
| 99 | R | A | -0.8050 | |
| 100 | P | A | -0.1940 | |
| 101 | P | A | 0.0951 | |
| 102 | C | A | -0.0050 | |
| 103 | G | A | 0.9839 | |
| 104 | S | A | 1.0680 | |
| 105 | W | A | 1.8226 | |
| 106 | F | A | 2.6693 | |
| 107 | L | A | 2.0648 | |
| 108 | P | A | 1.0226 | |
| 109 | G | A | 1.1264 | |
| 110 | Y | A | 2.6672 | |
| 111 | Y | A | 2.9305 | |
| 112 | Y | A | 2.5434 | |
| 113 | Y | A | 1.4737 | |
| 114 | G | A | 0.0813 | |
| 115 | M | A | 0.0000 | |
| 116 | D | A | -1.8051 | |
| 117 | Y | A | 0.0000 | |
| 118 | W | A | -0.7902 | |
| 119 | G | A | -1.1463 | |
| 120 | K | A | -2.0391 | |
| 121 | G | A | 0.0000 | |
| 122 | T | A | -0.1831 | |
| 123 | L | A | 0.8652 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | -0.5432 | |
| 126 | V | A | 0.0000 | |
| 127 | S | A | -1.3257 | |
| 128 | S | A | -1.0050 |