| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0970 | |
| 2 | V | H | -1.3884 | |
| 3 | Q | H | -1.3790 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.2313 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.3681 | |
| 8 | G | H | -0.6839 | |
| 9 | G | H | 0.1812 | |
| 11 | G | H | 0.8525 | |
| 12 | L | H | 1.4383 | |
| 13 | V | H | 0.0097 | |
| 14 | Q | H | -1.3522 | |
| 15 | P | H | -1.6104 | |
| 16 | G | H | -1.4232 | |
| 17 | G | H | -0.9984 | |
| 18 | S | H | -1.1442 | |
| 19 | L | H | -0.7030 | |
| 20 | R | H | -1.7358 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3813 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2933 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.1157 | |
| 27 | G | H | -1.4405 | |
| 28 | F | H | -1.5327 | |
| 29 | N | H | -2.5024 | |
| 30 | I | H | 0.0000 | |
| 35 | K | H | -2.8255 | |
| 36 | D | H | -2.9976 | |
| 37 | T | H | 0.0000 | |
| 38 | Y | H | -0.3344 | |
| 39 | I | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6236 | |
| 45 | A | H | -1.0372 | |
| 46 | P | H | -0.8142 | |
| 47 | G | H | -1.4529 | |
| 48 | K | H | -2.3893 | |
| 49 | G | H | -1.6391 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9846 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | R | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.3190 | |
| 58 | P | H | -1.0871 | |
| 59 | T | H | -1.1821 | |
| 62 | N | H | -0.8313 | |
| 63 | G | H | -0.3576 | |
| 64 | Y | H | 0.7568 | |
| 65 | T | H | 0.0608 | |
| 66 | R | H | -1.0228 | |
| 67 | Y | H | -1.3718 | |
| 68 | A | H | -1.5939 | |
| 69 | D | H | -2.6127 | |
| 70 | S | H | -1.7371 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.7645 | |
| 74 | G | H | -1.7332 | |
| 75 | R | H | -1.4652 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.9474 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.0903 | |
| 80 | A | H | -0.8045 | |
| 81 | D | H | -1.2867 | |
| 82 | T | H | -1.5835 | |
| 83 | S | H | -1.5392 | |
| 84 | K | H | -2.1973 | |
| 85 | N | H | -1.7981 | |
| 86 | T | H | -0.9007 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.4208 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1684 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2888 | |
| 93 | S | H | -1.2289 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.1944 | |
| 96 | A | H | -1.6548 | |
| 97 | E | H | -2.1954 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3238 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7400 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | S | H | 0.0000 | |
| 106 | R | H | -0.2952 | |
| 107 | W | H | 0.0000 | |
| 108 | G | H | -0.3647 | |
| 109 | G | H | -0.9878 | |
| 110 | D | H | -1.6256 | |
| 111 | G | H | -0.7289 | |
| 112 | F | H | 0.1418 | |
| 113 | Y | H | 0.4694 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | -0.3388 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.5378 | |
| 121 | G | H | -0.4132 | |
| 122 | T | H | 0.4855 | |
| 123 | L | H | 1.6987 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3939 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5434 | |
| 128 | S | H | -0.5878 | |
| 1 | D | L | -2.2761 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.3200 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4230 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.9095 | |
| 8 | P | L | -0.6974 | |
| 9 | S | L | -1.0049 | |
| 10 | S | L | -0.9699 | |
| 11 | L | L | -0.4093 | |
| 12 | S | L | -0.2453 | |
| 13 | A | L | -0.0970 | |
| 14 | S | L | -0.1234 | |
| 15 | V | L | 0.5802 | |
| 16 | G | L | -0.6536 | |
| 17 | D | L | -1.6274 | |
| 18 | R | L | -2.3147 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6546 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7324 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.7948 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.2427 | |
| 27 | Q | L | -2.9499 | |
| 28 | D | L | -2.6678 | |
| 29 | V | L | 0.0000 | |
| 36 | N | L | -1.8304 | |
| 37 | T | L | -0.8893 | |
| 38 | A | L | 0.0248 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.3104 | |
| 46 | P | L | -1.0446 | |
| 47 | G | L | -1.6541 | |
| 48 | K | L | -2.5974 | |
| 49 | A | L | -1.6344 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.2315 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 1.2036 | |
| 56 | S | L | 0.5124 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | 0.7311 | |
| 66 | F | L | 2.2111 | |
| 67 | L | L | 1.5039 | |
| 68 | Y | L | 0.7112 | |
| 69 | S | L | 0.0533 | |
| 70 | G | L | -0.3876 | |
| 71 | V | L | -0.1633 | |
| 72 | P | L | -0.2620 | |
| 74 | S | L | -0.3745 | |
| 75 | R | L | -0.7687 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | 0.0520 | |
| 78 | G | L | 0.1091 | |
| 79 | S | L | -0.5246 | |
| 80 | R | L | -1.5536 | |
| 83 | S | L | -1.2943 | |
| 84 | G | L | -1.7438 | |
| 85 | T | L | -2.1852 | |
| 86 | D | L | -1.9175 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7291 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6596 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4777 | |
| 93 | S | L | -1.1342 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.4588 | |
| 96 | P | L | -0.4387 | |
| 97 | E | L | -1.3155 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | 0.7599 | |
| 100 | A | L | -0.1197 | |
| 101 | T | L | -0.6544 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | H | L | 0.0000 | |
| 108 | Y | L | 0.8995 | |
| 109 | T | L | 0.2732 | |
| 114 | T | L | -0.2411 | |
| 115 | P | L | -0.6534 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | -0.6086 | |
| 118 | F | L | -0.4778 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.7762 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4424 |