| Chain sequence(s) |
A: IVIVKGHE
C: IVIVKGHE B: IVIVKGHE E: IVIVKGHE D: IVIVKGHE G: IVIVKGHE F: IVIVKGHE I: IVIVKGHE H: IVIVKGHE K: IVIVKGHE J: IVIVKGHE M: IVIVKGHE L: IVIVKGHE O: IVIVKGHE N: IVIVKGHE Q: IVIVKGHE P: IVIVKGHE S: IVIVKGHE R: IVIVKGHE T: IVIVKGHE input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:36)
[INFO] Main: Simulation completed successfully. (00:06:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 1.1517 | |
| 2 | V | A | 0.0000 | |
| 3 | I | A | 1.0603 | |
| 4 | V | A | 0.0000 | |
| 5 | K | A | -1.3596 | |
| 6 | G | A | 0.0000 | |
| 7 | H | A | -2.8039 | |
| 8 | E | A | -3.4748 | |
| 1 | I | B | 1.1815 | |
| 2 | V | B | 0.0000 | |
| 3 | I | B | 0.7076 | |
| 4 | V | B | 0.0000 | |
| 5 | K | B | -1.2174 | |
| 6 | G | B | 0.0000 | |
| 7 | H | B | -2.8704 | |
| 8 | E | B | -3.4383 | |
| 1 | I | C | 1.7475 | |
| 2 | V | C | 0.0000 | |
| 3 | I | C | 1.1920 | |
| 4 | V | C | 0.0000 | |
| 5 | K | C | -2.0353 | |
| 6 | G | C | 0.0000 | |
| 7 | H | C | -2.8273 | |
| 8 | E | C | -2.7199 | |
| 1 | I | D | 1.3440 | |
| 2 | V | D | 0.0000 | |
| 3 | I | D | 1.0425 | |
| 4 | V | D | 0.0000 | |
| 5 | K | D | -1.9488 | |
| 6 | G | D | 0.0000 | |
| 7 | H | D | -3.1878 | |
| 8 | E | D | -3.6684 | |
| 1 | I | E | 1.0283 | |
| 2 | V | E | 0.0000 | |
| 3 | I | E | 0.8405 | |
| 4 | V | E | 0.0000 | |
| 5 | K | E | -1.6575 | |
| 6 | G | E | 0.0000 | |
| 7 | H | E | -2.9125 | |
| 8 | E | E | -3.4602 | |
| 1 | I | F | 0.8464 | |
| 2 | V | F | 0.0000 | |
| 3 | I | F | 0.8794 | |
| 4 | V | F | 0.0000 | |
| 5 | K | F | -1.3896 | |
| 6 | G | F | 0.0000 | |
| 7 | H | F | -2.6145 | |
| 8 | E | F | -3.3610 | |
| 1 | I | G | 0.9416 | |
| 2 | V | G | 0.0000 | |
| 3 | I | G | 0.6915 | |
| 4 | V | G | 0.0000 | |
| 5 | K | G | -1.4407 | |
| 6 | G | G | 0.0000 | |
| 7 | H | G | -2.6621 | |
| 8 | E | G | -3.1564 | |
| 1 | I | H | 1.1203 | |
| 2 | V | H | 0.0000 | |
| 3 | I | H | 0.8129 | |
| 4 | V | H | 0.0000 | |
| 5 | K | H | -1.7263 | |
| 6 | G | H | 0.0000 | |
| 7 | H | H | -2.8885 | |
| 8 | E | H | -3.2641 | |
| 1 | I | I | 1.5068 | |
| 2 | V | I | 0.0000 | |
| 3 | I | I | 1.3966 | |
| 4 | V | I | 0.0000 | |
| 5 | K | I | -1.9295 | |
| 6 | G | I | 0.0000 | |
| 7 | H | I | -3.3193 | |
| 8 | E | I | -3.4306 | |
| 1 | I | J | 1.9367 | |
| 2 | V | J | 1.5393 | |
| 3 | I | J | 1.7444 | |
| 4 | V | J | 0.2266 | |
| 5 | K | J | -1.9442 | |
| 6 | G | J | -1.7894 | |
| 7 | H | J | -2.3469 | |
| 8 | E | J | -2.5773 | |
| 1 | I | K | 3.3257 | |
| 2 | V | K | 3.8755 | |
| 3 | I | K | 3.0530 | |
| 4 | V | K | 1.7137 | |
| 5 | K | K | -1.3255 | |
| 6 | G | K | -2.1661 | |
| 7 | H | K | -3.1822 | |
| 8 | E | K | -3.1640 | |
| 1 | I | L | 2.5042 | |
| 2 | V | L | 0.0000 | |
| 3 | I | L | 2.2978 | |
| 4 | V | L | 0.0000 | |
| 5 | K | L | -1.1848 | |
| 6 | G | L | 0.0000 | |
| 7 | H | L | -3.0051 | |
| 8 | E | L | -3.2879 | |
| 1 | I | M | 1.4625 | |
| 2 | V | M | 0.0000 | |
| 3 | I | M | 1.2964 | |
| 4 | V | M | 0.0000 | |
| 5 | K | M | -1.5136 | |
| 6 | G | M | 0.0000 | |
| 7 | H | M | -2.1765 | |
| 8 | E | M | -2.6688 | |
| 1 | I | N | 1.1558 | |
| 2 | V | N | 0.0000 | |
| 3 | I | N | 0.9669 | |
| 4 | V | N | 0.0000 | |
| 5 | K | N | -1.3475 | |
| 6 | G | N | 0.0000 | |
| 7 | H | N | -2.0718 | |
| 8 | E | N | -2.6994 | |
| 1 | I | O | 1.1741 | |
| 2 | V | O | 0.0000 | |
| 3 | I | O | 0.9161 | |
| 4 | V | O | 0.0000 | |
| 5 | K | O | -1.1631 | |
| 6 | G | O | 0.0000 | |
| 7 | H | O | -2.1685 | |
| 8 | E | O | -2.6473 | |
| 1 | I | P | 1.2863 | |
| 2 | V | P | 0.0000 | |
| 3 | I | P | 0.8992 | |
| 4 | V | P | 0.0000 | |
| 5 | K | P | -1.1655 | |
| 6 | G | P | 0.0000 | |
| 7 | H | P | -2.6265 | |
| 8 | E | P | -3.2629 | |
| 1 | I | Q | 1.2320 | |
| 2 | V | Q | 0.0000 | |
| 3 | I | Q | 0.9105 | |
| 4 | V | Q | 0.0000 | |
| 5 | K | Q | -1.1692 | |
| 6 | G | Q | 0.0000 | |
| 7 | H | Q | -2.5755 | |
| 8 | E | Q | -3.2858 | |
| 1 | I | R | 2.2156 | |
| 2 | V | R | 1.7257 | |
| 3 | I | R | 1.4766 | |
| 4 | V | R | 0.2567 | |
| 5 | K | R | -1.3603 | |
| 6 | G | R | -1.8403 | |
| 7 | H | R | -3.1051 | |
| 8 | E | R | -3.8245 | |
| 1 | I | S | 4.1439 | |
| 2 | V | S | 4.1522 | |
| 3 | I | S | 2.8834 | |
| 4 | V | S | 1.0236 | |
| 5 | K | S | -1.3551 | |
| 6 | G | S | -2.5514 | |
| 7 | H | S | -3.6273 | |
| 8 | E | S | -4.1023 | |
| 1 | I | T | 4.2226 | |
| 2 | V | T | 4.5363 | |
| 3 | I | T | 3.5214 | |
| 4 | V | T | 1.5968 | |
| 5 | K | T | -1.4216 | |
| 6 | G | T | -2.2292 | |
| 7 | H | T | -3.5131 | |
| 8 | E | T | -3.3929 |