| Chain sequence(s) |
H: EVILVESGGGSVKPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVATISGGGGITYYADSVKGRFTISRDNAKNALYLQMSSLRSEDTALYSCARLLVLYYSMDYWGQGTSVTVSS
L: DIQMNQSPSSLSASLGDTITISCHASQNINVWLSWYQQKPGNIPKLLIYKASNLNTGVPSRFSGSGSGTGFTLTISSLQPEDIATYFCQQGQSYPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:36)
[INFO] Main: Simulation completed successfully. (00:01:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.4743 | |
| 2 | V | H | 0.0058 | |
| 3 | I | H | 1.0891 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.8081 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.6035 | |
| 8 | G | H | -0.9117 | |
| 9 | G | H | -0.7511 | |
| 11 | G | H | -0.4906 | |
| 12 | S | H | -0.7074 | |
| 13 | V | H | -1.2409 | |
| 14 | K | H | -2.3747 | |
| 15 | P | H | -2.2198 | |
| 16 | G | H | -1.6760 | |
| 17 | G | H | -1.3039 | |
| 18 | S | H | -1.2142 | |
| 19 | L | H | -0.9065 | |
| 20 | K | H | -1.8247 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.4828 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0818 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.2503 | |
| 27 | G | H | -0.6436 | |
| 28 | F | H | -0.1640 | |
| 29 | T | H | -0.2236 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.7618 | |
| 36 | S | H | -0.0233 | |
| 37 | Y | H | 0.7455 | |
| 38 | T | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | T | H | -1.6949 | |
| 46 | P | H | -1.8025 | |
| 47 | E | H | -2.8463 | |
| 48 | K | H | -2.6378 | |
| 49 | R | H | -2.3756 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7668 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.3996 | |
| 58 | G | H | -0.0905 | |
| 59 | G | H | -0.5918 | |
| 62 | G | H | -0.3108 | |
| 63 | G | H | 0.0657 | |
| 64 | I | H | 1.3210 | |
| 65 | T | H | 0.8019 | |
| 66 | Y | H | 0.3887 | |
| 67 | Y | H | -0.6555 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.6669 | |
| 70 | S | H | -1.9861 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5925 | |
| 74 | G | H | -1.6972 | |
| 75 | R | H | -1.6991 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8218 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2881 | |
| 80 | R | H | -0.9375 | |
| 81 | D | H | -1.3218 | |
| 82 | N | H | -1.5103 | |
| 83 | A | H | -1.2388 | |
| 84 | K | H | -2.1737 | |
| 85 | N | H | -1.6147 | |
| 86 | A | H | -0.9461 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.5388 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.3844 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -1.1107 | |
| 93 | S | H | -1.2934 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -3.1184 | |
| 96 | S | H | -2.3559 | |
| 97 | E | H | -2.6162 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -1.0677 | |
| 100 | A | H | 0.0000 | |
| 101 | L | H | 0.0155 | |
| 102 | Y | H | 0.0000 | |
| 103 | S | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | L | H | 0.0000 | |
| 108 | L | H | 1.9060 | |
| 109 | V | H | 2.8357 | |
| 110 | L | H | 2.7572 | |
| 112 | Y | H | 1.8376 | |
| 113 | Y | H | 1.0475 | |
| 114 | S | H | 0.7652 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.2356 | |
| 117 | Y | H | 0.7873 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.8864 | |
| 121 | G | H | -0.4213 | |
| 122 | T | H | -0.3510 | |
| 123 | S | H | -0.3839 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.9612 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.5285 | |
| 128 | S | H | -1.0151 | |
| 1 | D | L | -2.3484 | |
| 2 | I | L | -2.0194 | |
| 3 | Q | L | -2.2868 | |
| 4 | M | L | 0.0000 | |
| 5 | N | L | -1.8969 | |
| 6 | Q | L | -1.3454 | |
| 7 | S | L | -1.0194 | |
| 8 | P | L | -0.7542 | |
| 9 | S | L | -0.9829 | |
| 10 | S | L | -1.1688 | |
| 11 | L | L | -0.7857 | |
| 12 | S | L | -1.1238 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.4815 | |
| 15 | L | L | 0.3949 | |
| 16 | G | L | -0.2902 | |
| 17 | D | L | -0.6785 | |
| 18 | T | L | -0.5074 | |
| 19 | I | L | 0.0000 | |
| 20 | T | L | -0.2241 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.7947 | |
| 23 | C | L | 0.0000 | |
| 24 | H | L | -2.1298 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.0198 | |
| 27 | Q | L | -2.5730 | |
| 28 | N | L | -2.2948 | |
| 29 | I | L | 0.0000 | |
| 36 | N | L | -1.4422 | |
| 37 | V | L | -0.4338 | |
| 38 | W | L | -0.1669 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.0161 | |
| 45 | K | L | -1.5314 | |
| 46 | P | L | -1.0114 | |
| 47 | G | L | -1.3171 | |
| 48 | N | L | -1.7357 | |
| 49 | I | L | -0.5485 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.8522 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.3128 | |
| 56 | K | L | -0.9672 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.8510 | |
| 66 | N | L | -1.1333 | |
| 67 | L | L | -0.2875 | |
| 68 | N | L | -0.3867 | |
| 69 | T | L | -0.3599 | |
| 70 | G | L | -0.4382 | |
| 71 | V | L | -0.2581 | |
| 72 | P | L | -0.3336 | |
| 74 | S | L | -0.4188 | |
| 75 | R | L | -0.6411 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.5054 | |
| 78 | G | L | -0.5947 | |
| 79 | S | L | -0.7494 | |
| 80 | G | L | -0.7830 | |
| 83 | S | L | -1.0025 | |
| 84 | G | L | -1.3683 | |
| 85 | T | L | -1.5077 | |
| 86 | G | L | -1.1685 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.5645 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.2948 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -0.7304 | |
| 93 | S | L | -0.5454 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.6771 | |
| 96 | P | L | -0.7936 | |
| 97 | E | L | -1.4325 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -1.0580 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.2781 | |
| 102 | Y | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.0000 | |
| 108 | Q | L | -0.5407 | |
| 109 | S | L | -0.2250 | |
| 114 | Y | L | -0.1945 | |
| 115 | P | L | -0.6105 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.7946 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.8124 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.0716 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.7370 | |
| 126 | I | L | -0.6107 | |
| 127 | K | L | -1.4113 |