| Chain sequence(s) |
A: MEFQFRSYSFPSASYDRPEKPRLHGVTEIRGPYSTVMGPRYLEDILESKGHFVDGLKFSGGSFSLMPRERVKRITALAHKHGIYVNTGGWAEHMLKKGLPFFNEYVQECKDLGFDIVELGTDFLDLQEADLLRLIRLVKNAGLQAKPELVFEAGRISSGQSGKGKTAQVQEESQEFDILIKRAERCLEAGADMIMVEAQGLTQNVPSWRTDVLAEIIGRLGLERTMFEAHEPKVFQWFLNNYGPKVNLFVNHCDVVELENLRSGTRGHSRWISL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:43)
[INFO] Main: Simulation completed successfully. (00:05:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5612 | |
| 2 | E | A | -0.2553 | |
| 3 | F | A | 1.3347 | |
| 4 | Q | A | 0.0161 | |
| 5 | F | A | 0.4632 | |
| 6 | R | A | -1.2419 | |
| 7 | S | A | -0.3711 | |
| 8 | Y | A | 0.6155 | |
| 9 | S | A | 0.3000 | |
| 10 | F | A | 1.4630 | |
| 11 | P | A | 0.3438 | |
| 12 | S | A | 0.1618 | |
| 13 | A | A | -0.4424 | |
| 14 | S | A | -0.8664 | |
| 15 | Y | A | -1.5402 | |
| 16 | D | A | -2.9176 | |
| 17 | R | A | -3.4704 | |
| 18 | P | A | -2.3114 | |
| 19 | E | A | -2.8270 | |
| 20 | K | A | -1.5604 | |
| 21 | P | A | -0.7099 | |
| 22 | R | A | -0.5832 | |
| 23 | L | A | 0.5303 | |
| 24 | H | A | -0.8668 | |
| 25 | G | A | 0.0000 | |
| 26 | V | A | 0.0000 | |
| 27 | T | A | 0.0000 | |
| 28 | E | A | 0.0000 | |
| 29 | I | A | 0.0000 | |
| 30 | R | A | -0.1610 | |
| 31 | G | A | 0.0000 | |
| 32 | P | A | 0.0000 | |
| 33 | Y | A | 1.6971 | |
| 34 | S | A | 0.7462 | |
| 35 | T | A | 1.0462 | |
| 36 | V | A | 2.0568 | |
| 37 | M | A | 0.0000 | |
| 38 | G | A | -0.1971 | |
| 39 | P | A | -1.6160 | |
| 40 | R | A | -2.4731 | |
| 41 | Y | A | -1.2864 | |
| 42 | L | A | 0.0000 | |
| 43 | E | A | -2.9989 | |
| 44 | D | A | -3.1042 | |
| 45 | I | A | 0.0000 | |
| 46 | L | A | 0.0000 | |
| 47 | E | A | -3.1178 | |
| 48 | S | A | -1.9404 | |
| 49 | K | A | -1.4758 | |
| 50 | G | A | 0.0000 | |
| 51 | H | A | -1.6496 | |
| 52 | F | A | -0.5575 | |
| 53 | V | A | 0.0000 | |
| 54 | D | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | L | A | 0.0000 | |
| 57 | K | A | 0.0000 | |
| 58 | F | A | 0.0000 | |
| 59 | S | A | 0.0000 | |
| 60 | G | A | -0.0489 | |
| 61 | G | A | 0.0000 | |
| 62 | S | A | 0.0000 | |
| 63 | F | A | 0.0000 | |
| 64 | S | A | 0.3188 | |
| 65 | L | A | 1.4194 | |
| 66 | M | A | -0.1946 | |
| 67 | P | A | -1.6659 | |
| 68 | R | A | -3.6662 | |
| 69 | E | A | -3.9715 | |
| 70 | R | A | -3.3416 | |
| 71 | V | A | 0.0000 | |
| 72 | K | A | -3.6113 | |
| 73 | R | A | -3.3858 | |
| 74 | I | A | 0.0000 | |
| 75 | T | A | 0.0000 | |
| 76 | A | A | -1.5974 | |
| 77 | L | A | -1.7755 | |
| 78 | A | A | 0.0000 | |
| 79 | H | A | -1.6718 | |
| 80 | K | A | -2.2607 | |
| 81 | H | A | -1.8835 | |
| 82 | G | A | -1.5262 | |
| 83 | I | A | 0.0000 | |
| 84 | Y | A | -0.3701 | |
| 85 | V | A | 0.0000 | |
| 86 | N | A | 0.0000 | |
| 87 | T | A | 0.0000 | |
| 88 | G | A | 0.0000 | |
| 89 | G | A | -0.0036 | |
| 90 | W | A | -0.0960 | |
| 91 | A | A | 0.0000 | |
| 92 | E | A | -0.4718 | |
| 93 | H | A | -0.8666 | |
| 94 | M | A | 0.0000 | |
| 95 | L | A | -1.0551 | |
| 96 | K | A | -2.1506 | |
| 97 | K | A | -2.2732 | |
| 98 | G | A | -1.0644 | |
| 99 | L | A | -0.3161 | |
| 100 | P | A | -0.4070 | |
| 101 | F | A | -0.4771 | |
| 102 | F | A | 0.0000 | |
| 103 | N | A | -1.3424 | |
| 104 | E | A | -2.3868 | |
| 105 | Y | A | 0.0000 | |
| 106 | V | A | 0.0000 | |
| 107 | Q | A | -3.1620 | |
| 108 | E | A | -3.1058 | |
| 109 | C | A | 0.0000 | |
| 110 | K | A | -3.4281 | |
| 111 | D | A | -3.4618 | |
| 112 | L | A | 0.0000 | |
| 113 | G | A | -1.9334 | |
| 114 | F | A | 0.0000 | |
| 115 | D | A | -1.0109 | |
| 116 | I | A | 0.0000 | |
| 117 | V | A | 0.0000 | |
| 118 | E | A | 0.0000 | |
| 119 | L | A | 0.0000 | |
| 120 | G | A | 0.1962 | |
| 121 | T | A | 0.0000 | |
| 122 | D | A | -0.0752 | |
| 123 | F | A | 0.9963 | |
| 124 | L | A | -0.3256 | |
| 125 | D | A | -1.5964 | |
| 126 | L | A | -1.3522 | |
| 127 | Q | A | -2.2157 | |
| 128 | E | A | -2.2409 | |
| 129 | A | A | -1.7569 | |
| 130 | D | A | -2.3638 | |
| 131 | L | A | 0.0000 | |
| 132 | L | A | -2.1731 | |
| 133 | R | A | -2.8817 | |
| 134 | L | A | 0.0000 | |
| 135 | I | A | 0.0000 | |
| 136 | R | A | -2.9999 | |
| 137 | L | A | -1.8941 | |
| 138 | V | A | 0.0000 | |
| 139 | K | A | -2.4368 | |
| 140 | N | A | -2.2178 | |
| 141 | A | A | -1.9001 | |
| 142 | G | A | -1.8140 | |
| 143 | L | A | 0.0000 | |
| 144 | Q | A | -1.4992 | |
| 145 | A | A | 0.0000 | |
| 146 | K | A | 0.0000 | |
| 147 | P | A | 0.0000 | |
| 148 | E | A | -0.3183 | |
| 149 | L | A | 0.0000 | |
| 150 | V | A | -0.3345 | |
| 151 | F | A | 0.0000 | |
| 152 | E | A | -1.0113 | |
| 153 | A | A | -0.8707 | |
| 154 | G | A | -1.1200 | |
| 155 | R | A | -1.1952 | |
| 156 | I | A | -0.0969 | |
| 157 | S | A | -1.1767 | |
| 158 | S | A | -1.1414 | |
| 159 | G | A | -1.2620 | |
| 160 | Q | A | -1.8885 | |
| 161 | S | A | -1.6492 | |
| 162 | G | A | -2.2636 | |
| 163 | K | A | -3.0128 | |
| 164 | G | A | -2.2307 | |
| 165 | K | A | -2.4240 | |
| 166 | T | A | -1.6277 | |
| 167 | A | A | -2.0605 | |
| 168 | Q | A | -2.2061 | |
| 169 | V | A | -0.7494 | |
| 170 | Q | A | -2.3162 | |
| 171 | E | A | -2.7606 | |
| 172 | E | A | -1.9149 | |
| 173 | S | A | -1.9112 | |
| 174 | Q | A | -2.3937 | |
| 175 | E | A | -1.4842 | |
| 176 | F | A | -1.6438 | |
| 177 | D | A | -1.9470 | |
| 178 | I | A | 0.0601 | |
| 179 | L | A | -0.2205 | |
| 180 | I | A | 0.0000 | |
| 181 | K | A | -1.3614 | |
| 182 | R | A | -1.0620 | |
| 183 | A | A | 0.0000 | |
| 184 | E | A | -1.4346 | |
| 185 | R | A | -1.8364 | |
| 186 | C | A | 0.0000 | |
| 187 | L | A | -1.4715 | |
| 188 | E | A | -2.1764 | |
| 189 | A | A | 0.0000 | |
| 190 | G | A | -1.5314 | |
| 191 | A | A | 0.0000 | |
| 192 | D | A | -1.4754 | |
| 193 | M | A | -0.9618 | |
| 194 | I | A | 0.0000 | |
| 195 | M | A | 0.0000 | |
| 196 | V | A | 0.0000 | |
| 197 | E | A | -0.6956 | |
| 198 | A | A | 0.0000 | |
| 199 | Q | A | -1.2972 | |
| 200 | G | A | 0.0000 | |
| 201 | L | A | 0.0000 | |
| 202 | T | A | 0.0000 | |
| 203 | Q | A | -1.6393 | |
| 204 | N | A | -1.8394 | |
| 205 | V | A | -1.0094 | |
| 206 | P | A | -0.6528 | |
| 207 | S | A | -0.5579 | |
| 208 | W | A | -0.6589 | |
| 209 | R | A | -0.9398 | |
| 210 | T | A | -1.2792 | |
| 211 | D | A | -2.3165 | |
| 212 | V | A | 0.0000 | |
| 213 | L | A | 0.0000 | |
| 214 | A | A | -1.8630 | |
| 215 | E | A | -2.8329 | |
| 216 | I | A | 0.0000 | |
| 217 | I | A | -1.4217 | |
| 218 | G | A | -1.6422 | |
| 219 | R | A | -2.1757 | |
| 220 | L | A | 0.0000 | |
| 221 | G | A | -1.4149 | |
| 222 | L | A | -1.0735 | |
| 223 | E | A | -1.9103 | |
| 224 | R | A | -1.6641 | |
| 225 | T | A | 0.0000 | |
| 226 | M | A | 0.0000 | |
| 227 | F | A | 0.0000 | |
| 228 | E | A | -0.6496 | |
| 229 | A | A | 0.0000 | |
| 230 | H | A | -1.0300 | |
| 231 | E | A | -1.5761 | |
| 232 | P | A | -1.7735 | |
| 233 | K | A | -2.1578 | |
| 234 | V | A | 0.0000 | |
| 235 | F | A | 0.0000 | |
| 236 | Q | A | -2.0260 | |
| 237 | W | A | -1.4644 | |
| 238 | F | A | 0.0000 | |
| 239 | L | A | 0.0000 | |
| 240 | N | A | -2.0049 | |
| 241 | N | A | -1.8798 | |
| 242 | Y | A | -1.0059 | |
| 243 | G | A | -1.1314 | |
| 244 | P | A | -1.5309 | |
| 245 | K | A | -1.4990 | |
| 246 | V | A | 0.0000 | |
| 247 | N | A | 0.0000 | |
| 248 | L | A | 0.0000 | |
| 249 | F | A | 0.0000 | |
| 250 | V | A | 0.0000 | |
| 251 | N | A | -0.5177 | |
| 252 | H | A | -0.0357 | |
| 253 | C | A | 0.4326 | |
| 254 | D | A | -0.2795 | |
| 255 | V | A | 0.0000 | |
| 256 | V | A | 0.2952 | |
| 257 | E | A | -1.0093 | |
| 258 | L | A | 0.0000 | |
| 259 | E | A | -0.7529 | |
| 260 | N | A | -1.1701 | |
| 261 | L | A | -1.2366 | |
| 262 | R | A | 0.0000 | |
| 263 | S | A | -1.3116 | |
| 264 | G | A | -0.8538 | |
| 265 | T | A | -0.9124 | |
| 266 | R | A | -1.8418 | |
| 267 | G | A | -0.7305 | |
| 268 | H | A | -1.4887 | |
| 269 | S | A | -1.2258 | |
| 270 | R | A | -1.7712 | |
| 271 | W | A | 0.0998 | |
| 272 | I | A | 0.2908 | |
| 273 | S | A | 0.4339 | |
| 274 | L | A | 1.6769 |