| Chain sequence(s) |
H: QVTLREESGPALVKPTQTLTLTCTVSGFSLSAYSVNWIRQPPGKALEWLAMIWGDGKIVYNSALKSRLTISKDTSKNQVVLTMTNMDPVDTATYYCAGDGYYPYAMDNWGQGSLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK
L: DIVMTQSPDSLSVSLGERATINCRASKSVDSYGNSFMHWYQQKPGQPPKLLIYLASNLESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQNNEDPRTFGGGTKVEIKRTVAAPSVFIFPPSDEEQLKSGTASVVCLLNNFYPREAKVQQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACCEVTHQGLSSPVTKSFNRGEC input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | LK154L,VE85H |
| Energy difference between WT (input) and mutated protein (by FoldX) | -0.556728 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:08:17)
[INFO] FoldX: Starting FoldX energy minimalization (00:08:40)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:12:29)
[INFO] Main: Simulation completed successfully. (00:12:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.0401 | |
| 2 | V | H | -0.1923 | |
| 3 | T | H | -0.6313 | |
| 4 | L | H | 0.0000 | |
| 5 | R | H | -2.0489 | |
| 6 | E | H | -1.3453 | |
| 7 | S | H | -0.7898 | |
| 8 | G | H | -0.3684 | |
| 9 | P | H | -0.1715 | |
| 10 | A | H | -0.2958 | |
| 11 | L | H | -0.2476 | |
| 12 | V | H | 0.0000 | |
| 13 | K | H | -2.5881 | |
| 14 | P | H | -2.3811 | |
| 15 | T | H | -2.1580 | |
| 16 | Q | H | -2.4181 | |
| 17 | T | H | -1.4910 | |
| 18 | L | H | 0.0000 | |
| 19 | T | H | -0.2037 | |
| 20 | L | H | 0.0000 | |
| 21 | T | H | -0.4428 | |
| 22 | C | H | 0.0000 | |
| 23 | T | H | -1.1339 | |
| 24 | V | H | 0.0000 | |
| 25 | S | H | -0.7176 | |
| 26 | G | H | -0.4672 | |
| 27 | F | H | 0.1039 | |
| 28 | S | H | -0.1570 | |
| 29 | L | H | 0.0000 | |
| 30 | S | H | -0.8423 | |
| 31 | A | H | -0.4352 | |
| 32 | Y | H | 0.0000 | |
| 33 | S | H | 0.0000 | |
| 34 | V | H | 0.0000 | |
| 35 | N | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | I | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.8749 | |
| 40 | P | H | -1.2674 | |
| 41 | P | H | -1.0328 | |
| 42 | G | H | -1.4393 | |
| 43 | K | H | -2.1942 | |
| 44 | A | H | -1.2125 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -0.8030 | |
| 47 | W | H | 0.0000 | |
| 48 | L | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | M | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | W | H | -0.8901 | |
| 53 | G | H | -1.2327 | |
| 54 | D | H | -2.2426 | |
| 55 | G | H | -1.7136 | |
| 56 | K | H | -1.7094 | |
| 57 | I | H | 0.0688 | |
| 58 | V | H | 0.0000 | |
| 59 | Y | H | -0.5203 | |
| 60 | N | H | -1.1911 | |
| 61 | S | H | -1.2455 | |
| 62 | A | H | -0.5337 | |
| 63 | L | H | -0.8617 | |
| 64 | K | H | -1.8569 | |
| 65 | S | H | -1.1623 | |
| 66 | R | H | -1.2034 | |
| 67 | L | H | 0.0000 | |
| 68 | T | H | -0.2162 | |
| 69 | I | H | 0.0000 | |
| 70 | S | H | -0.2091 | |
| 71 | K | H | -1.0775 | |
| 72 | D | H | -1.5900 | |
| 73 | T | H | -1.3542 | |
| 74 | S | H | -1.4778 | |
| 75 | K | H | -2.2816 | |
| 76 | N | H | -1.5955 | |
| 77 | Q | H | -1.4511 | |
| 78 | V | H | 0.0000 | |
| 79 | V | H | 0.0827 | |
| 80 | L | H | 0.0000 | |
| 81 | T | H | -0.0303 | |
| 82 | M | H | 0.0000 | |
| 82A | T | H | -1.3215 | |
| 82B | N | H | -2.3945 | |
| 82C | M | H | 0.0000 | |
| 83 | D | H | -3.1586 | |
| 84 | P | H | -2.1709 | |
| 85 | E | H | -2.4998 | mutated: VE85H |
| 86 | D | H | 0.0000 | |
| 87 | T | H | -0.9800 | |
| 88 | A | H | 0.0000 | |
| 89 | T | H | -0.1990 | |
| 90 | Y | H | 0.0000 | |
| 91 | Y | H | 0.0000 | |
| 92 | C | H | 0.0000 | |
| 93 | A | H | 0.0000 | |
| 94 | G | H | 0.0000 | |
| 95 | D | H | 0.0000 | |
| 96 | G | H | 0.6055 | |
| 97 | Y | H | 1.9247 | |
| 98 | Y | H | 2.1977 | |
| 99 | P | H | 0.0000 | |
| 100 | Y | H | 1.3389 | |
| 100A | A | H | 0.0000 | |
| 100B | M | H | 0.0000 | |
| 101 | D | H | -1.4110 | |
| 102 | N | H | -0.9171 | |
| 103 | W | H | -1.1570 | |
| 104 | G | H | 0.0000 | |
| 105 | Q | H | -1.9036 | |
| 106 | G | H | -1.2401 | |
| 107 | S | H | -0.6385 | |
| 108 | L | H | -0.1187 | |
| 109 | V | H | 0.0000 | |
| 110 | T | H | 0.0000 | |
| 111 | V | H | 0.0000 | |
| 112 | S | H | -1.0610 | |
| 113 | S | H | -0.8811 | |
| 114 | A | H | -0.5322 | |
| 115 | S | H | -0.6428 | |
| 116 | T | H | -0.6865 | |
| 117 | K | H | -1.1167 | |
| 118 | G | H | -1.3442 | |
| 119 | P | H | -0.5547 | |
| 120 | S | H | -0.3378 | |
| 121 | V | H | -0.3461 | |
| 122 | F | H | 0.0000 | |
| 123 | P | H | -1.1047 | |
| 124 | L | H | 0.0000 | |
| 125 | A | H | 0.0000 | |
| 126 | P | H | 0.0000 | |
| 127 | C | H | -0.8712 | |
| 128 | S | H | -0.8533 | |
| 129 | R | H | -1.0060 | |
| 130 | S | H | -0.9191 | |
| 131 | T | H | -0.7077 | |
| 132 | S | H | -0.8797 | |
| 133 | E | H | -1.3659 | |
| 134 | S | H | -0.9397 | |
| 135 | T | H | -0.6857 | |
| 136 | A | H | 0.0000 | |
| 137 | A | H | 0.0000 | |
| 138 | L | H | 0.0000 | |
| 139 | G | H | 0.0000 | |
| 140 | C | H | 0.0000 | |
| 141 | L | H | 0.0000 | |
| 142 | V | H | 0.0000 | |
| 143 | K | H | 0.0000 | |
| 144 | D | H | -0.2762 | |
| 145 | Y | H | 0.0000 | |
| 146 | F | H | 0.0000 | |
| 147 | P | H | 0.0000 | |
| 148 | E | H | -0.3274 | |
| 149 | P | H | -0.6386 | |
| 150 | V | H | 0.0000 | |
| 151 | T | H | -0.6792 | |
| 152 | V | H | -0.2507 | |
| 153 | S | H | -0.4711 | |
| 154 | W | H | 0.0000 | |
| 155 | N | H | -0.9267 | |
| 156 | S | H | -0.7608 | |
| 157 | G | H | -0.5697 | |
| 158 | A | H | -0.2394 | |
| 159 | L | H | -0.0678 | |
| 160 | T | H | -0.1879 | |
| 161 | S | H | -0.2118 | |
| 162 | G | H | -0.3366 | |
| 163 | V | H | 0.1332 | |
| 164 | H | H | -0.3126 | |
| 165 | T | H | -0.0178 | |
| 166 | F | H | 0.0000 | |
| 167 | P | H | -0.3534 | |
| 168 | A | H | 0.2562 | |
| 169 | V | H | 0.6966 | |
| 170 | L | H | 1.4530 | |
| 171 | Q | H | 0.4660 | |
| 172 | S | H | 0.0029 | |
| 173 | S | H | -0.1520 | |
| 174 | G | H | 0.1319 | |
| 175 | L | H | 0.2920 | |
| 176 | Y | H | 0.5893 | |
| 177 | S | H | 0.0000 | |
| 178 | L | H | 0.0000 | |
| 179 | S | H | 0.0000 | |
| 180 | S | H | 0.0000 | |
| 181 | V | H | 0.0000 | |
| 182 | V | H | 0.0000 | |
| 183 | T | H | -0.1332 | |
| 184 | V | H | 0.0000 | |
| 185 | P | H | -0.5168 | |
| 186 | S | H | -0.6667 | |
| 187 | S | H | -0.6302 | |
| 188 | S | H | -0.6576 | |
| 189 | L | H | -0.7450 | |
| 190 | G | H | -1.0790 | |
| 191 | T | H | -0.9009 | |
| 192 | K | H | -1.5279 | |
| 193 | T | H | -1.5054 | |
| 194 | Y | H | 0.0000 | |
| 195 | T | H | -1.9136 | |
| 196 | C | H | 0.0000 | |
| 197 | N | H | -1.6352 | |
| 198 | V | H | 0.0000 | |
| 199 | D | H | -2.0748 | |
| 200 | H | H | 0.0000 | |
| 201 | K | H | -2.7562 | |
| 202 | P | H | -1.5298 | |
| 203 | S | H | -1.7918 | |
| 204 | N | H | -2.6021 | |
| 205 | T | H | -2.0949 | |
| 206 | K | H | -2.7492 | |
| 207 | V | H | -1.4995 | |
| 208 | D | H | -2.6596 | |
| 209 | K | H | -2.1562 | |
| 210 | R | H | -2.8576 | |
| 211 | V | H | 0.0000 | |
| 212 | E | H | -2.7569 | |
| 213 | S | H | -1.8363 | |
| 214 | K | H | -2.5749 | |
| 1 | D | L | -2.3837 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.6563 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.9073 | |
| 6 | Q | L | -1.6679 | |
| 7 | S | L | -1.6126 | |
| 8 | P | L | -1.4196 | |
| 9 | D | L | -2.2001 | |
| 10 | S | L | -1.1408 | |
| 11 | L | L | -0.6320 | |
| 12 | S | L | -0.4595 | |
| 13 | V | L | -0.9402 | |
| 14 | S | L | -0.9145 | |
| 15 | L | L | 0.0622 | |
| 16 | G | L | -0.9660 | |
| 17 | E | L | -2.2960 | |
| 18 | R | L | -2.5745 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.7347 | |
| 21 | I | L | 0.0000 | |
| 22 | N | L | -1.9529 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.4337 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.2063 | |
| 27 | K | L | -2.3754 | |
| 27A | S | L | -1.9175 | |
| 27B | V | L | 0.0000 | |
| 27C | D | L | -1.3034 | |
| 27D | S | L | -0.4389 | |
| 28 | Y | L | 0.6249 | |
| 29 | G | L | -0.5068 | |
| 30 | N | L | -0.9974 | |
| 31 | S | L | 0.0000 | |
| 32 | F | L | -0.5166 | |
| 33 | M | L | 0.0000 | |
| 34 | H | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | Q | L | 0.0000 | |
| 39 | K | L | -1.7043 | |
| 40 | P | L | -1.4009 | |
| 41 | G | L | -1.5732 | |
| 42 | Q | L | -2.0033 | |
| 43 | P | L | -1.5139 | |
| 44 | P | L | 0.0000 | |
| 45 | K | L | -1.9237 | |
| 46 | L | L | 0.0000 | |
| 47 | L | L | 0.0000 | |
| 48 | I | L | 0.0000 | |
| 49 | Y | L | 0.1862 | |
| 50 | L | L | 0.0903 | |
| 51 | A | L | 0.0000 | |
| 52 | S | L | -0.6126 | |
| 53 | N | L | -0.7145 | |
| 54 | L | L | -0.4361 | |
| 55 | E | L | -0.9993 | |
| 56 | S | L | -0.7592 | |
| 57 | G | L | -0.8332 | |
| 58 | V | L | 0.0000 | |
| 59 | P | L | -1.1946 | |
| 60 | D | L | -2.0563 | |
| 61 | R | L | -1.5917 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.7982 | |
| 64 | G | L | -0.5243 | |
| 65 | S | L | -0.9315 | |
| 66 | G | L | -1.2994 | |
| 67 | S | L | -1.3531 | |
| 68 | G | L | -1.5596 | |
| 69 | T | L | -1.8820 | |
| 70 | D | L | -2.3160 | |
| 71 | F | L | 0.0000 | |
| 72 | T | L | -1.1708 | |
| 73 | L | L | 0.0000 | |
| 74 | T | L | -0.7301 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -1.7250 | |
| 77 | S | L | -1.3857 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -1.3560 | |
| 80 | A | L | -1.7168 | |
| 81 | E | L | -2.4965 | |
| 82 | D | L | 0.0000 | |
| 83 | V | L | 0.0000 | |
| 84 | A | L | 0.0000 | |
| 85 | V | L | -0.3067 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | Q | L | 0.0000 | |
| 90 | Q | L | 0.0000 | |
| 91 | N | L | -1.2148 | |
| 92 | N | L | -2.0106 | |
| 93 | E | L | -3.4834 | |
| 94 | D | L | -3.1518 | |
| 95 | P | L | 0.0000 | |
| 96 | R | L | 0.0000 | |
| 97 | T | L | -0.5712 | |
| 98 | F | L | 0.2107 | |
| 99 | G | L | 0.0000 | |
| 100 | G | L | -0.9270 | |
| 101 | G | L | -1.0657 | |
| 102 | T | L | 0.0000 | |
| 103 | K | L | -0.7534 | |
| 104 | V | L | 0.0000 | |
| 105 | E | L | -0.9777 | |
| 106 | I | L | 0.0000 | |
| 107 | K | L | -1.1963 | |
| 108 | R | L | -0.6549 | |
| 109 | T | L | 0.0967 | |
| 110 | V | L | 0.7203 | |
| 111 | A | L | 0.1094 | |
| 112 | A | L | -0.0557 | |
| 113 | P | L | 0.0000 | |
| 114 | S | L | -0.2397 | |
| 115 | V | L | 0.0000 | |
| 116 | F | L | 0.0000 | |
| 117 | I | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | P | L | 0.0000 | |
| 120 | P | L | 0.0000 | |
| 121 | S | L | 0.0000 | |
| 122 | D | L | -3.1529 | |
| 123 | E | L | -3.0344 | |
| 124 | Q | L | 0.0000 | |
| 125 | L | L | -2.2620 | |
| 126 | K | L | -2.8378 | |
| 127 | S | L | -1.7324 | |
| 128 | G | L | -1.2109 | |
| 129 | T | L | -1.0475 | |
| 130 | A | L | 0.0000 | |
| 131 | S | L | 0.0000 | |
| 132 | V | L | 0.0000 | |
| 133 | V | L | 0.0000 | |
| 134 | C | L | 0.0000 | |
| 135 | L | L | 0.0000 | |
| 136 | L | L | 0.0000 | |
| 137 | N | L | 0.0000 | |
| 138 | N | L | -0.9756 | |
| 139 | F | L | 0.0000 | |
| 140 | Y | L | 0.0000 | |
| 141 | P | L | -1.6814 | |
| 142 | R | L | -3.0553 | |
| 143 | E | L | -3.2671 | |
| 144 | A | L | -2.3790 | |
| 145 | K | L | -2.4388 | |
| 146 | V | L | -1.0924 | |
| 147 | Q | L | -1.1379 | |
| 148 | W | L | 0.0000 | |
| 149 | K | L | -1.7752 | |
| 150 | V | L | 0.0000 | |
| 151 | D | L | -2.2146 | |
| 152 | N | L | -2.2935 | |
| 153 | A | L | -1.7841 | |
| 154 | K | L | -2.4588 | mutated: LK154L |
| 155 | Q | L | -1.8126 | |
| 156 | S | L | -1.3763 | |
| 157 | G | L | -1.2086 | |
| 158 | N | L | -1.5287 | |
| 159 | S | L | -1.3198 | |
| 160 | Q | L | -1.1535 | |
| 161 | E | L | -1.6364 | |
| 162 | S | L | -0.7148 | |
| 163 | V | L | -0.7871 | |
| 164 | T | L | -1.0834 | |
| 165 | E | L | -2.0820 | |
| 166 | Q | L | 0.0000 | |
| 167 | D | L | -2.1938 | |
| 168 | S | L | -2.4654 | |
| 169 | K | L | -2.6981 | |
| 170 | D | L | -1.9522 | |
| 171 | S | L | 0.0000 | |
| 172 | T | L | 0.0000 | |
| 173 | Y | L | 0.0000 | |
| 174 | S | L | 0.0000 | |
| 175 | L | L | 0.0000 | |
| 176 | S | L | 0.0000 | |
| 177 | S | L | 0.0000 | |
| 178 | T | L | -0.6468 | |
| 179 | L | L | 0.0000 | |
| 180 | T | L | -0.6957 | |
| 181 | L | L | 0.0000 | |
| 182 | S | L | -1.1492 | |
| 183 | K | L | -2.0983 | |
| 184 | A | L | -1.9401 | |
| 185 | D | L | -2.7024 | |
| 186 | Y | L | 0.0000 | |
| 187 | E | L | -3.4731 | |
| 188 | K | L | -3.5958 | |
| 189 | H | L | -2.8515 | |
| 190 | K | L | -2.7902 | |
| 191 | V | L | -1.0773 | |
| 192 | Y | L | 0.0000 | |
| 193 | A | L | 0.0000 | |
| 194 | C | L | 0.0000 | |
| 195 | E | L | -0.8141 | |
| 196 | V | L | 0.0000 | |
| 197 | T | L | -1.2227 | |
| 198 | H | L | 0.0000 | |
| 199 | Q | L | -1.6758 | |
| 200 | G | L | -0.3030 | |
| 201 | L | L | -0.2057 | |
| 202 | S | L | -0.4827 | |
| 203 | S | L | -0.4274 | |
| 204 | P | L | -0.5583 | |
| 205 | V | L | -0.0027 | |
| 206 | T | L | -0.4358 | |
| 207 | K | L | -0.6816 | |
| 208 | S | L | -0.4570 | |
| 209 | F | L | 0.0000 | |
| 210 | N | L | -1.3224 | |
| 211 | R | L | -2.2193 | |
| 212 | G | L | -1.8611 | |
| 213 | E | L | -2.2596 | |
| 214 | C | L | -0.5498 |