| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTFYAMGWLRQAPGKEREFVAAISSSGGKTYYADSVKGRFTISRDNSKNTLYLQMNSLRPEDTAVYYCATGPGGTYTSDFRYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:08)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:08)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:08)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:08)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:08)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:16)
[INFO] Main: Simulation completed successfully. (00:01:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.8663 | |
| 2 | V | A | -1.1449 | |
| 3 | Q | A | -1.2200 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.5062 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.3336 | |
| 8 | G | A | -0.6334 | |
| 9 | G | A | 0.1404 | |
| 10 | G | A | 0.6378 | |
| 11 | L | A | 1.2971 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.3644 | |
| 14 | P | A | -1.4659 | |
| 15 | G | A | -1.3171 | |
| 16 | G | A | -0.8772 | |
| 17 | S | A | -1.0396 | |
| 18 | L | A | -0.8985 | |
| 19 | R | A | -2.1272 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4665 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.2914 | |
| 24 | A | A | -0.3833 | |
| 25 | S | A | -0.8579 | |
| 26 | G | A | -0.5946 | |
| 27 | F | A | 0.8409 | |
| 28 | T | A | 0.0000 | |
| 29 | F | A | 1.9595 | |
| 30 | Y | A | 1.1446 | |
| 31 | A | A | 0.0000 | |
| 32 | M | A | 0.0000 | |
| 33 | G | A | 0.0000 | |
| 34 | W | A | 0.0000 | |
| 35 | L | A | -0.1909 | |
| 36 | R | A | 0.0000 | |
| 37 | Q | A | -1.6417 | |
| 38 | A | A | -1.5564 | |
| 39 | P | A | -1.3886 | |
| 40 | G | A | -1.9506 | |
| 41 | K | A | -3.3417 | |
| 42 | E | A | -3.5494 | |
| 43 | R | A | -2.6973 | |
| 44 | E | A | -2.2109 | |
| 45 | F | A | -0.7276 | |
| 46 | V | A | 0.0000 | |
| 47 | A | A | 0.0000 | |
| 48 | A | A | 0.0000 | |
| 49 | I | A | 0.0000 | |
| 50 | S | A | -0.6131 | |
| 51 | S | A | -0.0930 | |
| 52 | S | A | -0.7046 | |
| 53 | G | A | -1.3957 | |
| 54 | G | A | -1.5148 | |
| 55 | K | A | -1.9424 | |
| 56 | T | A | -0.7273 | |
| 57 | Y | A | -0.1672 | |
| 58 | Y | A | -0.5475 | |
| 59 | A | A | -1.2279 | |
| 60 | D | A | -2.3555 | |
| 61 | S | A | -1.7493 | |
| 62 | V | A | 0.0000 | |
| 63 | K | A | -2.5495 | |
| 64 | G | A | -1.7772 | |
| 65 | R | A | -1.3734 | |
| 66 | F | A | 0.0000 | |
| 67 | T | A | -0.8255 | |
| 68 | I | A | 0.0000 | |
| 69 | S | A | -0.7649 | |
| 70 | R | A | -1.2550 | |
| 71 | D | A | -1.9674 | |
| 72 | N | A | -1.8999 | |
| 73 | S | A | -1.8798 | |
| 74 | K | A | -2.6236 | |
| 75 | N | A | -1.7356 | |
| 76 | T | A | -1.2596 | |
| 77 | L | A | 0.0000 | |
| 78 | Y | A | -0.6212 | |
| 79 | L | A | 0.0000 | |
| 80 | Q | A | -1.3143 | |
| 81 | M | A | 0.0000 | |
| 82 | N | A | -1.3601 | |
| 83 | S | A | -1.1163 | |
| 84 | L | A | 0.0000 | |
| 85 | R | A | -1.9828 | |
| 86 | P | A | -1.7783 | |
| 87 | E | A | -2.2198 | |
| 88 | D | A | 0.0000 | |
| 89 | T | A | -0.3908 | |
| 90 | A | A | 0.0000 | |
| 91 | V | A | 0.7820 | |
| 92 | Y | A | 0.0000 | |
| 93 | Y | A | 0.3736 | |
| 94 | C | A | 0.0000 | |
| 95 | A | A | 0.0000 | |
| 96 | T | A | 0.0000 | |
| 97 | G | A | 0.0000 | |
| 98 | P | A | -0.6111 | |
| 99 | G | A | -1.1908 | |
| 100 | G | A | -0.7942 | |
| 101 | T | A | -0.6551 | |
| 102 | Y | A | -0.2954 | |
| 103 | T | A | -0.3177 | |
| 104 | S | A | -1.3326 | |
| 105 | D | A | -2.4051 | |
| 106 | F | A | 0.0000 | |
| 107 | R | A | -2.0151 | |
| 108 | Y | A | -0.8097 | |
| 109 | W | A | 0.1723 | |
| 110 | G | A | -0.0562 | |
| 111 | Q | A | -0.8844 | |
| 112 | G | A | 0.1248 | |
| 113 | T | A | 0.5732 | |
| 114 | L | A | 1.7259 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | 0.3264 | |
| 117 | V | A | 0.0000 | |
| 118 | S | A | -0.7848 | |
| 119 | S | A | -0.5986 |