| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASVSGDAPPAIGKYYMHWVRQAPGKGLEWVGLIAGGEDGITIYDPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARAPFGGAAYIEWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
L: DIQMTQSPSSLSASVGDRVTITCSGGSGADIAWYQQKPGKAPKVLIYNGSLPPGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCAACTRKLTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:07)
[INFO] Main: Simulation completed successfully. (00:08:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.3446 | |
| 2 | V | H | -1.3325 | |
| 3 | Q | H | -1.5278 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.0831 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4896 | |
| 8 | G | H | -0.7301 | |
| 9 | G | H | -0.3675 | |
| 10 | G | H | -0.2441 | |
| 11 | L | H | -0.1025 | |
| 12 | V | H | 0.0000 | |
| 13 | Q | H | -1.7256 | |
| 14 | P | H | -1.8979 | |
| 15 | G | H | -1.5425 | |
| 16 | G | H | -1.2320 | |
| 17 | S | H | -1.2951 | |
| 18 | L | H | -1.0146 | |
| 19 | R | H | -1.7080 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4079 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.3478 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.8083 | |
| 26 | V | H | -1.1297 | |
| 27 | S | H | -1.4977 | |
| 28 | G | H | -1.7969 | |
| 29 | D | H | -2.3262 | |
| 30 | A | H | -1.4504 | |
| 31 | P | H | -0.9989 | |
| 32 | P | H | -1.2918 | |
| 33 | A | H | -1.1058 | |
| 34 | I | H | 0.0000 | |
| 35 | G | H | -1.9305 | |
| 36 | K | H | -1.4691 | |
| 37 | Y | H | -0.2011 | |
| 38 | Y | H | 0.1489 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6989 | |
| 45 | A | H | -1.1468 | |
| 46 | P | H | -1.0218 | |
| 47 | G | H | -1.4950 | |
| 48 | K | H | -2.3224 | |
| 49 | G | H | -1.5152 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7966 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | L | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | A | H | 0.0000 | |
| 58 | G | H | -0.9610 | |
| 59 | G | H | 0.0000 | |
| 60 | E | H | -2.9342 | |
| 61 | D | H | -2.4414 | |
| 62 | G | H | -0.7947 | |
| 63 | I | H | 1.3031 | |
| 64 | T | H | 0.7866 | |
| 65 | I | H | 0.2860 | |
| 66 | Y | H | -0.7374 | |
| 67 | D | H | -1.6115 | |
| 68 | P | H | -1.9366 | |
| 69 | K | H | -2.5970 | |
| 70 | F | H | 0.0000 | |
| 71 | Q | H | -2.6617 | |
| 72 | D | H | -2.9140 | |
| 73 | R | H | -1.9891 | |
| 74 | A | H | 0.0000 | |
| 75 | T | H | -0.8625 | |
| 76 | I | H | 0.0000 | |
| 77 | S | H | -0.7696 | |
| 78 | A | H | -1.7650 | |
| 79 | D | H | -2.2781 | |
| 80 | N | H | -2.6615 | |
| 81 | S | H | -1.8286 | |
| 82 | K | H | -2.2594 | |
| 83 | N | H | -1.6782 | |
| 84 | T | H | 0.0000 | |
| 85 | A | H | 0.0000 | |
| 86 | Y | H | -0.4296 | |
| 87 | L | H | 0.0000 | |
| 88 | Q | H | -1.0064 | |
| 89 | M | H | 0.0000 | |
| 90 | N | H | -1.6108 | |
| 91 | S | H | -1.5012 | |
| 92 | L | H | 0.0000 | |
| 93 | R | H | -2.6987 | |
| 94 | A | H | -1.9179 | |
| 95 | E | H | -2.3556 | |
| 96 | D | H | 0.0000 | |
| 97 | T | H | -0.7886 | |
| 98 | A | H | 0.0000 | |
| 99 | V | H | 0.2296 | |
| 100 | Y | H | 0.0000 | |
| 101 | Y | H | 0.0000 | |
| 102 | C | H | 0.0000 | |
| 103 | A | H | 0.0000 | |
| 104 | R | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | P | H | 0.4722 | |
| 107 | F | H | 1.0475 | |
| 108 | G | H | 0.0866 | |
| 109 | G | H | -0.6142 | |
| 110 | A | H | 0.0000 | |
| 111 | A | H | 0.0528 | |
| 112 | Y | H | 0.4082 | |
| 113 | I | H | 0.0000 | |
| 114 | E | H | -0.5291 | |
| 115 | W | H | -0.5843 | |
| 116 | G | H | 0.0000 | |
| 117 | Q | H | -1.5501 | |
| 118 | G | H | 0.0000 | |
| 119 | T | H | -0.0591 | |
| 120 | L | H | 0.2663 | |
| 121 | V | H | 0.0000 | |
| 122 | T | H | -0.4992 | |
| 123 | V | H | 0.0000 | |
| 124 | S | H | -1.0532 | |
| 125 | S | H | -0.7362 | |
| 126 | A | H | -0.5222 | |
| 127 | S | H | -0.6435 | |
| 128 | T | H | -0.8658 | |
| 129 | K | H | -1.4171 | |
| 130 | G | H | -1.4408 | |
| 131 | P | H | 0.0000 | |
| 132 | S | H | -0.4320 | |
| 133 | V | H | 0.0000 | |
| 134 | F | H | 0.0000 | |
| 135 | P | H | -1.1505 | |
| 136 | L | H | 0.0000 | |
| 137 | A | H | -1.2085 | |
| 138 | P | H | 0.0000 | |
| 139 | S | H | -0.8904 | |
| 140 | S | H | -0.6346 | |
| 141 | K | H | -0.7957 | |
| 142 | S | H | 0.0000 | |
| 143 | T | H | -0.6062 | |
| 144 | S | H | -0.6802 | |
| 145 | G | H | -0.8292 | |
| 146 | G | H | -0.8916 | |
| 147 | T | H | -0.6036 | |
| 148 | A | H | 0.0000 | |
| 149 | A | H | 0.0000 | |
| 150 | L | H | 0.0000 | |
| 151 | G | H | 0.0000 | |
| 152 | C | H | 0.0000 | |
| 153 | L | H | 0.0000 | |
| 154 | V | H | 0.0000 | |
| 155 | K | H | 0.0000 | |
| 156 | D | H | -0.3920 | |
| 157 | Y | H | 0.0000 | |
| 158 | F | H | 0.0000 | |
| 159 | P | H | 0.0000 | |
| 160 | E | H | -0.5270 | |
| 161 | P | H | -0.6387 | |
| 162 | V | H | -0.6652 | |
| 163 | T | H | -0.5719 | |
| 164 | V | H | -0.4034 | |
| 165 | S | H | -0.4111 | |
| 166 | W | H | 0.0000 | |
| 167 | N | H | -0.7908 | |
| 168 | S | H | -0.6925 | |
| 169 | G | H | -0.5240 | |
| 170 | A | H | -0.2463 | |
| 171 | L | H | 0.0125 | |
| 172 | T | H | -0.1464 | |
| 173 | S | H | -0.1374 | |
| 174 | G | H | -0.1138 | |
| 175 | V | H | 0.2118 | |
| 176 | H | H | -0.2277 | |
| 177 | T | H | -0.1237 | |
| 178 | F | H | 0.0000 | |
| 179 | P | H | -0.1814 | |
| 180 | A | H | 0.3358 | |
| 181 | V | H | 0.7657 | |
| 182 | L | H | 1.4379 | |
| 183 | Q | H | 0.4435 | |
| 184 | S | H | -0.0468 | |
| 185 | S | H | -0.1697 | |
| 186 | G | H | 0.1238 | |
| 187 | L | H | 0.1808 | |
| 188 | Y | H | 0.5538 | |
| 189 | S | H | 0.0000 | |
| 190 | L | H | 0.0000 | |
| 191 | S | H | 0.0000 | |
| 192 | S | H | 0.0000 | |
| 193 | V | H | 0.0000 | |
| 194 | V | H | 0.0000 | |
| 195 | T | H | -0.0962 | |
| 196 | V | H | 0.0000 | |
| 197 | P | H | -0.5362 | |
| 198 | S | H | -0.5632 | |
| 199 | S | H | -0.5701 | |
| 200 | S | H | 0.0000 | |
| 201 | L | H | -0.7468 | |
| 202 | G | H | -0.9444 | |
| 203 | T | H | -0.6666 | |
| 204 | Q | H | -1.0836 | |
| 205 | T | H | -1.0782 | |
| 206 | Y | H | 0.0000 | |
| 207 | I | H | -1.3359 | |
| 208 | C | H | 0.0000 | |
| 209 | N | H | -1.5286 | |
| 210 | V | H | 0.0000 | |
| 211 | N | H | -1.9253 | |
| 212 | H | H | 0.0000 | |
| 213 | K | H | -2.7160 | |
| 214 | P | H | -1.5961 | |
| 215 | S | H | -1.8790 | |
| 216 | N | H | -2.5890 | |
| 217 | T | H | -2.0764 | |
| 218 | K | H | -2.7129 | |
| 219 | V | H | -1.6896 | |
| 220 | D | H | -2.6155 | |
| 221 | K | H | -2.2791 | |
| 222 | K | H | -2.5876 | |
| 223 | V | H | 0.0000 | |
| 224 | E | H | -2.8346 | |
| 225 | P | H | -1.8467 | |
| 226 | K | H | -2.3463 | |
| 227 | S | H | -1.6679 | |
| 228 | C | H | -1.2560 | |
| 229 | D | H | -2.6889 | |
| 230 | K | H | -2.6991 | |
| 231 | T | H | -1.6743 | |
| 232 | H | H | -1.8833 | |
| 1 | D | L | -1.9481 | |
| 2 | I | L | -1.0537 | |
| 3 | Q | L | -1.5570 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.8546 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7132 | |
| 8 | P | L | -0.7570 | |
| 9 | S | L | -1.0356 | |
| 10 | S | L | -1.1573 | |
| 11 | L | L | -0.8762 | |
| 12 | S | L | -1.2035 | |
| 13 | A | L | -1.1529 | |
| 14 | S | L | -1.0520 | |
| 15 | V | L | -0.3344 | |
| 16 | G | L | -0.8879 | |
| 17 | D | L | -2.0338 | |
| 18 | R | L | -2.4252 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6668 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.6044 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -1.1868 | |
| 25 | G | L | -0.9843 | |
| 26 | G | L | 0.0000 | |
| 27 | S | L | -1.1110 | |
| 28 | G | L | -1.2040 | |
| 29 | A | L | 0.0000 | |
| 30 | D | L | -1.6898 | |
| 31 | I | L | 0.0000 | |
| 32 | A | L | 0.0000 | |
| 33 | W | L | 0.0000 | |
| 34 | Y | L | 0.0000 | |
| 35 | Q | L | 0.0000 | |
| 36 | Q | L | 0.0000 | |
| 37 | K | L | -1.8152 | |
| 38 | P | L | -1.3817 | |
| 39 | G | L | -1.5834 | |
| 40 | K | L | -2.5567 | |
| 41 | A | L | -1.7265 | |
| 42 | P | L | 0.0000 | |
| 43 | K | L | -1.6729 | |
| 44 | V | L | 0.0000 | |
| 45 | L | L | 0.0000 | |
| 46 | I | L | 0.0000 | |
| 47 | Y | L | -0.4487 | |
| 48 | N | L | -1.6002 | |
| 49 | G | L | -1.2495 | |
| 50 | S | L | -0.4349 | |
| 51 | L | L | 0.0933 | |
| 52 | P | L | 0.0000 | |
| 53 | P | L | -0.3228 | |
| 54 | G | L | -0.4535 | |
| 55 | V | L | -0.2642 | |
| 56 | P | L | -0.3155 | |
| 57 | S | L | -0.3969 | |
| 58 | R | L | -0.6682 | |
| 59 | F | L | 0.0000 | |
| 60 | S | L | -0.3366 | |
| 61 | G | L | -0.5458 | |
| 62 | S | L | -1.0322 | |
| 63 | G | L | -1.3209 | |
| 64 | S | L | -1.4069 | |
| 65 | G | L | -1.3578 | |
| 66 | T | L | -1.4047 | |
| 67 | D | L | -2.1899 | |
| 68 | Y | L | -1.2101 | |
| 69 | T | L | -0.7241 | |
| 70 | L | L | 0.0000 | |
| 71 | T | L | -0.5862 | |
| 72 | I | L | 0.0000 | |
| 73 | S | L | -1.2946 | |
| 74 | S | L | -1.1868 | |
| 75 | L | L | 0.0000 | |
| 76 | Q | L | -1.1880 | |
| 77 | P | L | -1.7146 | |
| 78 | E | L | -2.2547 | |
| 79 | D | L | 0.0000 | |
| 80 | F | L | -1.2965 | |
| 81 | A | L | 0.0000 | |
| 82 | T | L | 0.0000 | |
| 83 | Y | L | 0.0000 | |
| 84 | Y | L | 0.0000 | |
| 85 | C | L | 0.0000 | |
| 86 | A | L | 0.0000 | |
| 87 | A | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | T | L | -1.4081 | |
| 90 | R | L | -1.8046 | |
| 91 | K | L | -1.6802 | |
| 92 | L | L | 0.0000 | |
| 93 | T | L | -0.8852 | |
| 94 | F | L | -0.4047 | |
| 95 | G | L | 0.0000 | |
| 96 | Q | L | -1.7109 | |
| 97 | G | L | 0.0000 | |
| 98 | T | L | 0.0000 | |
| 99 | K | L | -2.1362 | |
| 100 | V | L | 0.0000 | |
| 101 | E | L | -1.5089 | |
| 102 | I | L | 0.0000 | |
| 103 | K | L | -1.5126 | |
| 104 | R | L | -0.8582 | |
| 105 | T | L | -0.1181 | |
| 106 | V | L | 0.1806 | |
| 107 | A | L | -0.1020 | |
| 108 | A | L | -0.1101 | |
| 109 | P | L | 0.0000 | |
| 110 | S | L | -0.1325 | |
| 111 | V | L | -0.1139 | |
| 112 | F | L | 0.0000 | |
| 113 | I | L | 0.0000 | |
| 114 | F | L | 0.0000 | |
| 115 | P | L | -0.5023 | |
| 116 | P | L | 0.0000 | |
| 117 | S | L | -1.7389 | |
| 118 | D | L | -2.9796 | |
| 119 | E | L | -2.7391 | |
| 120 | Q | L | 0.0000 | |
| 121 | L | L | -2.1050 | |
| 122 | K | L | -2.7442 | |
| 123 | S | L | -1.7257 | |
| 124 | G | L | -1.2519 | |
| 125 | T | L | -0.9601 | |
| 126 | A | L | 0.0000 | |
| 127 | S | L | 0.0000 | |
| 128 | V | L | 0.0000 | |
| 129 | V | L | 0.0000 | |
| 130 | C | L | 0.0000 | |
| 131 | L | L | 0.0000 | |
| 132 | L | L | 0.0000 | |
| 133 | N | L | 0.0000 | |
| 134 | N | L | -0.7688 | |
| 135 | F | L | 0.0000 | |
| 136 | Y | L | 0.0000 | |
| 137 | P | L | -1.8041 | |
| 138 | R | L | -3.0908 | |
| 139 | E | L | -3.2923 | |
| 140 | A | L | -2.3815 | |
| 141 | K | L | -2.6446 | |
| 142 | V | L | -1.1958 | |
| 143 | Q | L | -0.7855 | |
| 144 | W | L | 0.0000 | |
| 145 | K | L | -0.3913 | |
| 146 | V | L | 0.0000 | |
| 147 | D | L | -1.4871 | |
| 148 | N | L | -1.2931 | |
| 149 | A | L | -0.1257 | |
| 150 | L | L | 0.7165 | |
| 151 | Q | L | -0.2167 | |
| 152 | S | L | -0.4475 | |
| 153 | G | L | -0.8287 | |
| 154 | N | L | -0.7053 | |
| 155 | S | L | -0.8461 | |
| 156 | Q | L | -0.7262 | |
| 157 | E | L | -1.3597 | |
| 158 | S | L | -0.5932 | |
| 159 | V | L | -0.5747 | |
| 160 | T | L | -0.9362 | |
| 161 | E | L | -1.8162 | |
| 162 | Q | L | 0.0000 | |
| 163 | D | L | -1.9714 | |
| 164 | S | L | -2.2502 | |
| 165 | K | L | -2.6487 | |
| 166 | D | L | -1.9348 | |
| 167 | S | L | 0.0000 | |
| 168 | T | L | 0.0000 | |
| 169 | Y | L | 0.0000 | |
| 170 | S | L | 0.0000 | |
| 171 | L | L | 0.0000 | |
| 172 | S | L | 0.0000 | |
| 173 | S | L | 0.0000 | |
| 174 | T | L | 0.0000 | |
| 175 | L | L | 0.0000 | |
| 176 | T | L | -0.3150 | |
| 177 | L | L | -0.5233 | |
| 178 | S | L | -1.0569 | |
| 179 | K | L | -1.7735 | |
| 180 | A | L | -1.6223 | |
| 181 | D | L | -2.2028 | |
| 182 | Y | L | 0.0000 | |
| 183 | E | L | -3.0360 | |
| 184 | K | L | -3.2047 | |
| 185 | H | L | -2.7876 | |
| 186 | K | L | -3.2148 | |
| 187 | V | L | -1.6294 | |
| 188 | Y | L | 0.0000 | |
| 189 | A | L | 0.0000 | |
| 190 | C | L | 0.0000 | |
| 191 | E | L | -0.7074 | |
| 192 | V | L | 0.0000 | |
| 193 | T | L | -1.2344 | |
| 194 | H | L | 0.0000 | |
| 195 | Q | L | -1.7933 | |
| 196 | G | L | -0.4750 | |
| 197 | L | L | -0.2593 | |
| 198 | S | L | -0.4575 | |
| 199 | S | L | -0.4108 | |
| 200 | P | L | -0.5103 | |
| 201 | V | L | 0.0941 | |
| 202 | T | L | -0.4129 | |
| 203 | K | L | -0.7485 | |
| 204 | S | L | -0.6801 | |
| 205 | F | L | 0.0000 | |
| 206 | N | L | -1.9238 | |
| 207 | R | L | -2.6020 | |
| 208 | G | L | -2.2040 | |
| 209 | E | L | -2.1649 | |
| 210 | C | L | -1.0589 |